Detail information of GWHGAAEX013907/evm.TU.scaffold_54.117


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG05311.00E-11Protein phosphatase 1, regulatory subunit, and related proteins
nrgi|719969129|ref|XP_010267518.1|1.20E-14PREDICTED: uncharacterized protein LOC104604715 isoform X2 [Nelumbo nucifera]
trEMBLtr|M0TGR0|M0TGR0_MUSAM2.00E-14Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P11720_001}
TAIRAT1G782301.00E-11Outer arm dynein light chain 1 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005931671183167576+
Transcript Sequence

Network for GWHGAAEX013907

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.510
SRR2545915Juvenile tuber10.760
SRP108465SRR5643513five period of Gastrodia elata6.220
SRR5643514five period of Gastrodia elata6.550
SRR5643515five period of Gastrodia elata5.770
SRR5643524five period of Gastrodia elata6.200
SRR5643525five period of Gastrodia elata9.410
SRR5643528five period of Gastrodia elata8.170
SRR5643658five period of Gastrodia elata11.440
SRR5643659five period of Gastrodia elata2.370
SRR5643660five period of Gastrodia elata2.900
SRR5643661five period of Gastrodia elata5.040
SRR5643662five period of Gastrodia elata4.850
SRR5643663five period of Gastrodia elata3.610
SRR5643664five period of Gastrodia elata3.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.550
SRR6049655Rhizomagastrodiae_C368-T10_good_18.510
SRR6049656Rhizomagastrodiae_C368-T07_good_15.430
SRR6049657Rhizomagastrodiae_C368-T07_good_13.650
SRR6049658Rhizomagastrodiae_C368-T04_good_12.080
SRR6049659Rhizomagastrodiae_C368-T04_good_11.040
SRR6049660Rhizomagastrodiae_C368-T01_good_12.100
SRR6049661Rhizomagastrodiae_C368-T04_good_13.540
SRR6049662Rhizomagastrodiae_C368-T01_good_12.430
SRR6049663Rhizomagastrodiae_C368-T01_good_12.150
SRR6049664Rhizomagastrodiae_C368-T10_good_14.030
SRR6049665Rhizomagastrodiae_C368-T10_good_14.030
SRP279888GastroGastrodia elata tuber 4.05
JuvenJuvenile tuber9.36
Mother_GastroMother tuber of Gastrodia elata 11.33
Mother_JuvenMother tuber of Juvenile 9.16