Detail information of GWHGAAEX013915/evm.TU.scaffold_54.129


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|669030639|emb|CDM85231.1|3.89E-79unnamed protein product [Triticum aestivum]
Swissprottr|Q9XIN8|FB119_ARATH6.00E-49F-box protein At2g27310
trEMBLtr|A0A077S618|A0A077S618_WHEAT1.00E-79Chromosome 3B, genomic scaffold, cultivar Chinese Spring {ECO:0000313|EMBL:CDM85231.1}
TAIRAT2G273102.00E-48F-box family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005934368853438834-
Transcript Sequence

Network for GWHGAAEX013915

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.580
SRR2545915Juvenile tuber4.770
SRP108465SRR5643513five period of Gastrodia elata8.160
SRR5643514five period of Gastrodia elata5.750
SRR5643515five period of Gastrodia elata8.030
SRR5643524five period of Gastrodia elata5.180
SRR5643525five period of Gastrodia elata4.390
SRR5643528five period of Gastrodia elata2.350
SRR5643658five period of Gastrodia elata5.750
SRR5643659five period of Gastrodia elata16.460
SRR5643660five period of Gastrodia elata6.740
SRR5643661five period of Gastrodia elata14.850
SRR5643662five period of Gastrodia elata10.260
SRR5643663five period of Gastrodia elata7.150
SRR5643664five period of Gastrodia elata8.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_16.040
SRR6049655Rhizomagastrodiae_C368-T10_good_16.280
SRR6049656Rhizomagastrodiae_C368-T07_good_17.500
SRR6049657Rhizomagastrodiae_C368-T07_good_18.100
SRR6049658Rhizomagastrodiae_C368-T04_good_19.230
SRR6049659Rhizomagastrodiae_C368-T04_good_19.640
SRR6049660Rhizomagastrodiae_C368-T01_good_18.000
SRR6049661Rhizomagastrodiae_C368-T04_good_112.160
SRR6049662Rhizomagastrodiae_C368-T01_good_18.110
SRR6049663Rhizomagastrodiae_C368-T01_good_16.610
SRR6049664Rhizomagastrodiae_C368-T10_good_17.380
SRR6049665Rhizomagastrodiae_C368-T10_good_17.380
SRP279888GastroGastrodia elata tuber 4.92
JuvenJuvenile tuber6.64
Mother_GastroMother tuber of Gastrodia elata 17.73
Mother_JuvenMother tuber of Juvenile 19.64