Detail information of GWHGAAEX013917/evm.TU.scaffold_54.131


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427737941|ref|YP_007057485.1|9.00E-12hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
KOGKOG05313.00E-85Protein phosphatase 1, regulatory subunit, and related proteins
nrgi|672121511|ref|XP_008784056.1|9.46E-136PREDICTED: protein phosphatase 1 regulatory subunit 7 [Phoenix dactylifera]
Swissprottr|Q09JZ4|DAAF1_CHLRE6.00E-06Leucine-rich repeat-containing protein ODA7
trEMBLtr|B8A9Y7|B8A9Y7_ORYSI1.00E-112Putative uncharacterized protein {ECO:0000313|EMBL:EEC72231.1}
TAIRAT5G223203.00E-85Leucine-rich repeat (LRR) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005934671823515739-
Transcript Sequence

Network for GWHGAAEX013917

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms195.470
SRR2545915Juvenile tuber131.060
SRP108465SRR5643513five period of Gastrodia elata20.470
SRR5643514five period of Gastrodia elata15.480
SRR5643515five period of Gastrodia elata14.480
SRR5643524five period of Gastrodia elata14.350
SRR5643525five period of Gastrodia elata17.380
SRR5643528five period of Gastrodia elata12.260
SRR5643658five period of Gastrodia elata17.090
SRR5643659five period of Gastrodia elata36.430
SRR5643660five period of Gastrodia elata44.230
SRR5643661five period of Gastrodia elata32.340
SRR5643662five period of Gastrodia elata42.790
SRR5643663five period of Gastrodia elata38.090
SRR5643664five period of Gastrodia elata48.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_169.320
SRR6049655Rhizomagastrodiae_C368-T10_good_131.380
SRR6049656Rhizomagastrodiae_C368-T07_good_148.630
SRR6049657Rhizomagastrodiae_C368-T07_good_1107.080
SRR6049658Rhizomagastrodiae_C368-T04_good_1118.370
SRR6049659Rhizomagastrodiae_C368-T04_good_1152.130
SRR6049660Rhizomagastrodiae_C368-T01_good_188.810
SRR6049661Rhizomagastrodiae_C368-T04_good_1103.540
SRR6049662Rhizomagastrodiae_C368-T01_good_149.090
SRR6049663Rhizomagastrodiae_C368-T01_good_164.400
SRR6049664Rhizomagastrodiae_C368-T10_good_129.830
SRR6049665Rhizomagastrodiae_C368-T10_good_129.830
SRP279888GastroGastrodia elata tuber 60.71
JuvenJuvenile tuber30.08
Mother_GastroMother tuber of Gastrodia elata 19.71
Mother_JuvenMother tuber of Juvenile 20.67