Detail information of GWHGAAEX013925/evm.TU.scaffold_54.145


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG27713.00E-36Subunit of tRNA-specific adenosine-34 deaminase
nrgi|672117742|ref|XP_008782063.1|1.43E-48PREDICTED: probable inactive tRNA-specific adenosine deaminase-like protein 3 isoform X3 [Phoenix dactylifera]
trEMBLtr|U5FVB2|U5FVB2_POPTR5.00E-44Uncharacterized protein {ECO:0000313|EMBL:ERP53881.1}
TAIRAT5G246703.00E-36Cytidine/deoxycytidylate deaminase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005937788053802616-
Transcript Sequence

Network for GWHGAAEX013925

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.570
SRR2545915Juvenile tuber9.810
SRP108465SRR5643513five period of Gastrodia elata3.030
SRR5643514five period of Gastrodia elata3.160
SRR5643515five period of Gastrodia elata2.410
SRR5643524five period of Gastrodia elata4.230
SRR5643525five period of Gastrodia elata5.590
SRR5643528five period of Gastrodia elata2.550
SRR5643658five period of Gastrodia elata6.810
SRR5643659five period of Gastrodia elata0.310
SRR5643660five period of Gastrodia elata0.220
SRR5643661five period of Gastrodia elata4.920
SRR5643662five period of Gastrodia elata0.670
SRR5643663five period of Gastrodia elata0.390
SRR5643664five period of Gastrodia elata0.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.040
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.050
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.60
JuvenJuvenile tuber2.34
Mother_GastroMother tuber of Gastrodia elata 1.24
Mother_JuvenMother tuber of Juvenile 3.91