Detail information of GWHGAAEX013928/evm.TU.scaffold_54.148


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695061934|ref|XP_009419418.1|6.12E-67PREDICTED: protein YLS9 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SJ52|YLS9_ARATH1.00E-44Protein YLS9
trEMBLtr|M0U4M5|M0U4M5_MUSAM2.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P29680_001}
TAIRAT2G359805.00E-44Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005938078103808851-
Transcript Sequence

Network for GWHGAAEX013928

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03168.12LEA_21061991.20E-11
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms144.630
SRR2545915Juvenile tuber113.750
SRP108465SRR5643513five period of Gastrodia elata135.840
SRR5643514five period of Gastrodia elata65.920
SRR5643515five period of Gastrodia elata225.270
SRR5643524five period of Gastrodia elata89.620
SRR5643525five period of Gastrodia elata912.000
SRR5643528five period of Gastrodia elata791.840
SRR5643658five period of Gastrodia elata598.170
SRR5643659five period of Gastrodia elata162.170
SRR5643660five period of Gastrodia elata26.470
SRR5643661five period of Gastrodia elata66.600
SRR5643662five period of Gastrodia elata157.010
SRR5643663five period of Gastrodia elata65.180
SRR5643664five period of Gastrodia elata872.480
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1433.470
SRR6049655Rhizomagastrodiae_C368-T10_good_1900.080
SRR6049656Rhizomagastrodiae_C368-T07_good_1247.730
SRR6049657Rhizomagastrodiae_C368-T07_good_1329.800
SRR6049658Rhizomagastrodiae_C368-T04_good_1329.070
SRR6049659Rhizomagastrodiae_C368-T04_good_1403.390
SRR6049660Rhizomagastrodiae_C368-T01_good_1444.310
SRR6049661Rhizomagastrodiae_C368-T04_good_1337.190
SRR6049662Rhizomagastrodiae_C368-T01_good_1149.330
SRR6049663Rhizomagastrodiae_C368-T01_good_1335.190
SRR6049664Rhizomagastrodiae_C368-T10_good_1311.680
SRR6049665Rhizomagastrodiae_C368-T10_good_1311.680
SRP279888GastroGastrodia elata tuber 116.45
JuvenJuvenile tuber32.04
Mother_GastroMother tuber of Gastrodia elata 765.28
Mother_JuvenMother tuber of Juvenile 374.18