Gene detail

Detail information of GWHGAAEX013934/evm.TU.scaffold_54.155

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG3158	7.00E-46	HSP90 co-chaperone p23
nr	gi\|731395454\|ref\|XP_010652179.1\|	5.02E-64	PREDICTED: uncharacterized protein OsI_027940 isoform X2 [Vitis vinifera]
Swissprot	tr\|P0C8Z0\|Y8359_ORYSI	2.00E-57	Uncharacterized protein OsI_027940
trEMBL	tr\|C6SXA1\|C6SXA1_SOYBN	3.00E-63	Putative uncharacterized protein {ECO:0000313\|EMBL:ACU13874.1}
TAIR	AT4G02450	7.00E-46	HSP20-like chaperones superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000059	4017675	4055229	+

Transcript Sequence
>GWHTAAEX013934 GAATGATCAAAAAGTTTTAAGAAAATAATTAATCAATCTATTTACATGTGTCGCAGACGCTCCCACACGTGCAAAAATCGAGTCTCATGCCCTACCCTCGCAATCTATCAATACCCGAGTTGTGTGAAAAAGGCAAAGATTTCGGTCGGTGGACATTCCTATTATTTAGGGTTTAAGTTTTTTCTCAGGCCATTAACATGAGTCGTCATCCCGAGGTCAAGTGGGCCCAGAGGCTTGACAAGATCTTCCTAACGATCCTTTTAGCTGATGCAAAAAATGTTCAAATTAACATTGAACCGGATGGTATTTTCAGCTTTTCTGGCATAGTTGGTTCAGACAATATCTTCTATGAGCTGAAACTGGAGCTCTTTGATAAAGTCAATGTAGAGACCAGCAAACTTAACACAGGTGCTCGGAGCATCTTCTGTGTCATTGTCAAAGCAGAAAATGGGTGGTGGAAAAAGCTATTACGTGGTGATGGAAAACTGCCACACTACATAAAAGTTGATTGGGATAAATGGGTGGATGAAGATGACGGTAAGAATGAGGATGAGTTTGGAGGAATGGACTTCTCGAAGTTTGGTAATATGGGGGATATGAATGGTGATGATGATCTTGTTGATAGTGATGATGACGGGACTGAAGATGCCAATAAAACCGGAGGCGAGGATAAAATATCAGCAGTTCCAACTTAATAAGAAGGCCTTCAAATTTTGTTTATTTTACTCTTTGTAGGTCTTCTGCCTTGTATGGTTAAAATTTGTTACTTGATGCCTGCCTTATAAACAAAAATGGAAGATTTTATAACTAAAAGGTGATCTCCTGCTAATCTAACCAAAATGGATTTGACAGCAAAAATAAAACAAAATAAAGCAAACAATAAATCTGAGTGAAGTTCATGTTGGATAGCAGTGCCTGATTTGTTATGCTTCTCTTTGAATTTTGGCATTGGAAAACCTTGCATATTGACAAGTAAATTGGGGGGAGAGATTTTGCTCGTGGGCTCAGGCTTAATGGCATATTGAGCTAGAAATCATTGGGGCTGGTCTTGTTGAAGAGGTTGAGCCCATGATTGTTATTTCTAGTTGTGTACTAGCATTAGGCAGCAAATCACATTTCCTAATACTAGCTCATGTGAAAATTAGCAAGTCATTAAAGTTTTTGTGAGATTAAATAAGAAAAAAAGCATGAAAACTGGGCTAAACCAAAGAGGAATTAGCAGACTTTCAGATATCACTTGTTTAACTACCCAAAGCTGCAGTCGAGATCACAACTCGCACGTGCACATGTACTCCCTCCTGCACGCACACGCTCTCCCTCATGCACACGCACATGCGCGTGCCCCACGAGCACGAGCATGCCCACACACATAGTATGATAAATGTAATATTCTCTTCCATTGTATATATATGCACTTATATGTAACTATTGCAATATATACAATTTAATGTATTTGATGTATGTATAGTATGAATATATAACTATGGTTATTATAAAACATATCCATTATTA

Network for GWHGAAEX013934

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04969.15	CS	6	81	2.00E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	52.110
SRP064423	SRR2545915	Juvenile tuber	72.590
SRP108465	SRR5643513	five period of Gastrodia elata	80.740
	SRR5643514	five period of Gastrodia elata	102.180
	SRR5643515	five period of Gastrodia elata	95.310
	SRR5643524	five period of Gastrodia elata	103.630
	SRR5643525	five period of Gastrodia elata	57.160
	SRR5643528	five period of Gastrodia elata	59.180
	SRR5643658	five period of Gastrodia elata	43.070
	SRR5643659	five period of Gastrodia elata	75.310
	SRR5643660	five period of Gastrodia elata	72.480
	SRR5643661	five period of Gastrodia elata	78.980
	SRR5643662	five period of Gastrodia elata	64.800
	SRR5643663	five period of Gastrodia elata	73.060
	SRR5643664	five period of Gastrodia elata	61.230
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	47.980
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	73.780
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	55.150
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	38.510
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	40.250
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	35.830
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	42.900
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	42.140
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	67.720
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	59.400
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	78.550
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	78.550
SRP279888	Gastro	Gastrodia elata tuber	78.57
	Juven	Juvenile tuber	81.81
	Mother_Gastro	Mother tuber of Gastrodia elata	38.51
	Mother_Juven	Mother tuber of Juvenile	47.68