Gene detail

Detail information of GWHGAAEX013935/evm.TU.scaffold_54.156

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|521464512\|ref\|YP_008151634.1\|	1.00E-24	hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
KOG	KOG1187	2.00E-139	Serine/threonine protein kinase
nr	gi\|743772288\|ref\|XP_010916449.1\|	0	PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X3 [Elaeis guineensis]
Swissprot	tr\|P0C5E2\|Y1839_ARATH	3.00E-140	Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBL	tr\|I1NW66\|I1NW66_ORYGL	9.00E-158	Uncharacterized protein {ECO:0000313\|EnsemblPlants:ORGLA01G0410600.1} (Fragment)
TAIR	AT1G25390	2.00E-139	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000059	4062911	4066435	-

Transcript Sequence
>GWHTAAEX013935 GTCATTCAAAATTTGTGAAGCATACAGTGTTGACGCCTTTCGTAGCGTGCCCAACCTGCTATTGCAATGCTATCAGATCCCTTCAATAATATCAGGCGAACTTCCCGAGAATAACAAAAGAGCAAAATCCGATACGCCAAACGACCCACCATTTCTTCTCCCTTGGCTACTTTTCTGAATTAAAATGTTCTTCGGCTCCTTCCTCCTCTCTCTTCTCCTGGCCGCATGCTTCTTTCTCTCTTCTTCTTCTTCTTCTTCGTCTTCCTGCCCTCCCGAACCCCTTCACTGCGGAAACACAACCCTCGATATACAGTTTCCTTTCTTCACCAGCAGCTCGGAGGAATCCTGCCCCGGGCTTCACTTCGTCCAGTGCATCGATTTCGTCCCGGCCGTTCATTTCTTCGGAGACAACTACGTGTACCCGGTCAGGAACATCTCGTACAGGAGCAAGACCATCACGATCCATGATCTGAGGCTCAGCTCTTACTTTCGAGGCTCGAATTGCGATTTCGCATACTCTTTCAGGAGGCCGATTCCGGCGTTCAACTTCACCGCCGTCTCCGTCTCCCTGCCGTCGGGGGAGTCCTTCTTCAACTGCGAAGGAGGCTACGATTTCTCGCGCGATATATTTCGCGTGGGGTATAATCTGACCGTGTGCAGGCACTACAGTCTGTATTACTTCAGGGATTTTGGGGATCGGAGCTCCGGATCGCTCCCGAGAAGCTGCTCTGTATCCAAAGATCTTTGGTTCCATTGGGAGCTCTATTTTGGAGGAGGGAACGGCAGTCGGATCTCTCTTCTTGGAGTCGGATTTTCGCCGCGATGGAACGGCACGGATTGCTTCACATGCCGGATTTCTTCTCCGGGTGATTGCAGCGGTGCGGATGGATCCGAGTGCGATTGCAGAGATAGCTGCTACGTGAAGAAGCGCAGGAAATATGATTTTGTCATTGGTGCGTCCATCACTGCTGCCGTCGTCAGCGTCATTCTCATAAGCAGTTTCCTCGGCTGCATCCACCTCCGGCGAAAAAAAGGCAAAGGCCGCTCCACTTCCATCTCCAGTCTTCTCTCCCATCAGCAATCCTCCATCATCAGCCCTCCTCCCTCATCGAAGGACTCCGAGCTATCCGGAAGCCATCAACAGACCCACATTTTCTCCTACAAAGAGCTCCGCGAAGCCACCGGATCGTTCGATGCCGCGATGCAGATCGGCGACGGCGGATTCGGCACCGTCTACAGAGGGATTCTCCGCGATGGCCGCTCGGTCGCCGTGAAACGCCTCTACGAGAGTAACTTCCGGCGGGCGGAGCACTTCGCGAACGAGATAGCGATCCTCTCCCGGCTCCGGCACCCGAACCTCGTGTCGCTCTACGGCAGCACGTCCCCGAGGGGAAGCGAGCTCGCCCTCGTCTACGAGTTCGTCCCCAACGGTACGGTGGCGGATCACCTCCACGGCGATCGGGCGTGGGAGGGACGGCTAACATGGCCCCTCCGCCTCTCCGTGGCCGTCGAGACGGCGGCTGCGCTCACGTACCTCCACGCCGTGACCCCCCCAATCATACACCGCGACGTGAAGACCGGGAACATCCTCCTCGACGCTGAATTCCGCGTTAAGGTCGCGGACTTCGGCCTCTCTCGGCTTTTCCCGGCGGACATGAAGGCCACCCACATCTCGACGGCGCCGCAGGGCACCCCCGGGTACCTGGACCCGGAGTACCACCAGTGCTACCAGCTCACGGACCGAAGCGATGTCTTCAGCTTCGGAGTCGTTCTCGCCGAGCTCGTGTCATCGAAGCCTGCGGTCGACCTCTGCCGGAGCCGGCACGAGATCAATTTGTCCACGCTGGTGGTCAGCAGGGTGCAGGGAGGGAGAATGGAGGAGCTGATGGACCCGAAGCTCGGGTTCGAGTCCGACCCGACTGTCAGGACGATGATGAGGCAGGTCGCAGAGCTCGCCTTCCGTTGCTTGCAGATTGATAGGGAGATGCGGCCGCCGGTAAAGGAAGTGCTGGAGGTCCTCAGAGGGATCCAGAGCCGCGGAGCGTCTCAGGCGCATTCCATCAAACACGTTGCGGACAGGATTTGCCTCCACTCTCCCCAGTCGGTCACCGAGAAATGGGTGAGTAGTCGCTCTTCCACGCCTAATTCTAGCCATTGATCCCATTTATATCAGTCAGAGATTTGAATTTTTAATATGTCGAGGATTCAAATACAAGAACATAATCGCTTAGCCATAATATTATTCCATTCTTTATTTAATAAAATTTCCTTACTACGATGTATTTTTTTTTTTTACTTTATTTTCTTCTTCAGTATGATGTAATTGTTTGTTTTTTATCTCTAAATATACACTCTTTAATGCCTCAGTTATTAATTTATTTAAAATTAATGATTAACG

Network for GWHGAAEX013935

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	339	610	7.50E-44

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_WAK_LRK10L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.160
SRP064423	SRR2545915	Juvenile tuber	5.160
SRP108465	SRR5643513	five period of Gastrodia elata	13.000
	SRR5643514	five period of Gastrodia elata	11.420
	SRR5643515	five period of Gastrodia elata	13.960
	SRR5643524	five period of Gastrodia elata	14.450
	SRR5643525	five period of Gastrodia elata	26.670
	SRR5643528	five period of Gastrodia elata	56.640
	SRR5643658	five period of Gastrodia elata	17.730
	SRR5643659	five period of Gastrodia elata	11.260
	SRR5643660	five period of Gastrodia elata	12.070
	SRR5643661	five period of Gastrodia elata	9.170
	SRR5643662	five period of Gastrodia elata	10.350
	SRR5643663	five period of Gastrodia elata	8.780
	SRR5643664	five period of Gastrodia elata	13.410
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.710
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	15.080
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.830
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	9.800
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.510
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	13.450
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.790
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	13.810
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.600
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	14.570
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.790
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.790
SRP279888	Gastro	Gastrodia elata tuber	7.87
	Juven	Juvenile tuber	5.09
	Mother_Gastro	Mother tuber of Gastrodia elata	87.00
	Mother_Juven	Mother tuber of Juvenile	50.92