Detail information of GWHGAAEX013940/evm.TU.scaffold_54.164


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743800596|ref|XP_010926019.1|1.74E-46PREDICTED: uncharacterized protein LOC105048419 [Elaeis guineensis]
trEMBLtr|M0S1R4|M0S1R4_MUSAM2.00E-38Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P21060_001}
TAIRAT3G182956.00E-21Protein of unknown function (DUF1639)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005941972634198523-
Transcript Sequence

Network for GWHGAAEX013940

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07797.13DUF16391912402.00E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.090
SRR2545915Juvenile tuber5.920
SRP108465SRR5643513five period of Gastrodia elata7.630
SRR5643514five period of Gastrodia elata10.780
SRR5643515five period of Gastrodia elata8.000
SRR5643524five period of Gastrodia elata9.450
SRR5643525five period of Gastrodia elata4.370
SRR5643528five period of Gastrodia elata5.170
SRR5643658five period of Gastrodia elata5.480
SRR5643659five period of Gastrodia elata7.210
SRR5643660five period of Gastrodia elata5.560
SRR5643661five period of Gastrodia elata6.750
SRR5643662five period of Gastrodia elata6.270
SRR5643663five period of Gastrodia elata6.560
SRR5643664five period of Gastrodia elata5.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.080
SRR6049655Rhizomagastrodiae_C368-T10_good_19.730
SRR6049656Rhizomagastrodiae_C368-T07_good_18.430
SRR6049657Rhizomagastrodiae_C368-T07_good_18.030
SRR6049658Rhizomagastrodiae_C368-T04_good_16.930
SRR6049659Rhizomagastrodiae_C368-T04_good_15.440
SRR6049660Rhizomagastrodiae_C368-T01_good_14.810
SRR6049661Rhizomagastrodiae_C368-T04_good_17.430
SRR6049662Rhizomagastrodiae_C368-T01_good_18.090
SRR6049663Rhizomagastrodiae_C368-T01_good_16.430
SRR6049664Rhizomagastrodiae_C368-T10_good_111.640
SRR6049665Rhizomagastrodiae_C368-T10_good_111.640
SRP279888GastroGastrodia elata tuber 6.01
JuvenJuvenile tuber10.72
Mother_GastroMother tuber of Gastrodia elata 10.18
Mother_JuvenMother tuber of Juvenile 9.80