Detail information of GWHGAAEX013948/evm.TU.scaffold_54.176


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG41972.00E-35FOG: PPR repeat
nrgi|255573752|ref|XP_002527797.1|2.36E-39conserved hypothetical protein [Ricinus communis]
Swissprottr|Q56XJ7|Y4276_ARATH5.00E-07Uncharacterized protein At4g22758
trEMBLtr|B9SP78|B9SP78_RICCO9.00E-40Putative uncharacterized protein {ECO:0000313|EMBL:EEF34607.1}
TAIRAT1G707802.00E-35Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005945254834526921+
Transcript Sequence

Network for GWHGAAEX013948

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.340
SRR2545915Juvenile tuber5.330
SRP108465SRR5643513five period of Gastrodia elata26.430
SRR5643514five period of Gastrodia elata15.980
SRR5643515five period of Gastrodia elata10.050
SRR5643524five period of Gastrodia elata17.710
SRR5643525five period of Gastrodia elata41.180
SRR5643528five period of Gastrodia elata36.470
SRR5643658five period of Gastrodia elata23.010
SRR5643659five period of Gastrodia elata6.920
SRR5643660five period of Gastrodia elata5.040
SRR5643661five period of Gastrodia elata5.300
SRR5643662five period of Gastrodia elata7.430
SRR5643663five period of Gastrodia elata5.810
SRR5643664five period of Gastrodia elata15.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.070
SRR6049655Rhizomagastrodiae_C368-T10_good_174.690
SRR6049656Rhizomagastrodiae_C368-T07_good_128.520
SRR6049657Rhizomagastrodiae_C368-T07_good_131.810
SRR6049658Rhizomagastrodiae_C368-T04_good_124.580
SRR6049659Rhizomagastrodiae_C368-T04_good_126.330
SRR6049660Rhizomagastrodiae_C368-T01_good_126.160
SRR6049661Rhizomagastrodiae_C368-T04_good_129.690
SRR6049662Rhizomagastrodiae_C368-T01_good_114.920
SRR6049663Rhizomagastrodiae_C368-T01_good_113.240
SRR6049664Rhizomagastrodiae_C368-T10_good_140.310
SRR6049665Rhizomagastrodiae_C368-T10_good_140.310
SRP279888GastroGastrodia elata tuber 8.84
JuvenJuvenile tuber12.19
Mother_GastroMother tuber of Gastrodia elata 28.68
Mother_JuvenMother tuber of Juvenile 16.44