Gene detail

Detail information of GWHGAAEX013962/CADD01104.4.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000059	5008169	5013546	-

Transcript Sequence
>GWHTAAEX013962 CCCACAAAAGTATATTCAACATTACACATTAAATTAATACATATTTATATATTTTAGAGTAATAGTAGCAATAGCATTTCTAATAATTTTATCTAGCTTCGTTAGCTCTCGTTTTGCTCTCGTTCCTCTTTTGGTTCTCGGAAAAACCGTAGGGTTTTCCTTCACTGCAAATGGCGACCCTTCTCTTCTGGGGCCACCGCCGCTTCCACCCATACAAAATCTCTCCTGTGCTACATCTCCTTCGTCTTTACCCCTCGCTCATATTTCGCTAAGACCTCTTCTTAGATAAACTGGAAGTCCCTCTTTTCCTCTAGGGATTATGCTCTCACTCTCTTATCACCCTCCTTCTAGACTGGAATGTCCATATCGACGAGCTCAAATATGGACAAATTGTCTCATAGGTTATTCTCTTGGGAAAACACACTCCTACAAAGTTCTTCTTGAAGCCATGACCAAACTTTGGAAGCTAAAAGGCTCCTTCTCCCTCTTCACAATGTCGGGTGGTTTCTCTTCTCGGATTCACCTGTCCTGAGGATGAACGGTATTGTGCTTTCAGGAAGTCCCTGCTTTTTTTACTTCAATGTTCCGTTTATTTGAAGGCCTTGGACTCGATTCTGTTCCGTCTCTAACATCTTTCTCTTCCTTCCCCTCAAGATTAAATTCGGTTCAGGATTGCTTTTGGTAGGATATGTGTGGAGGTTGATAAACAGTGCAACTCTTCTTGATTCATTAAAATTACCATCAATGGAAAGACAACTACTCAATCAGTTCTTTACTATTGGATCCCCAAATGTTGCGAGGTTTGCAATCATTCTTTCCTGCTGCATGTGATTGTGCTAAACATGTCCCGGATACAGTCTTGAGAAGTAGAAGTCGTATCAGAAGAAATCAGAGGACTTATTCTGCCTCACTAAGTTGTGCACCTAGCCACTCACAGCACAACAACCCGATTATGCCACTCTTTTTCAGTTGTAACCATATCTCCCATTCAGGAGCCCACTCTTAACATTCAGGAGTCCTCCCAACCCACCGGCTGTCTCAAATCCCAACTCCACTCCTTCTCCACAAACTCGCTCCCCAATCAAAATGCCAAATGCCACTGATAACGTTATCTCCTGTCCAGTCCCTACTAATCCTTCGCTACATTCACCAATAGTCACCTCTCCACCAGCTTCTATAATCCCACCATCTTCTATAATCCCACCATCTTCAAATTCTCCTACCAACTGGAGCATCTCTTCTACTACCAATAATGCTTAACAGACATAGAAGGGTAAGATCTAAGCTTCACTAGAAGCTCGTTTTCTCTTTTCTATATTCTATATTTCGTATAAAGCTTGTTATTGTTTTTTGTTATGACCAATCTCACTGCTTTTGGATGTGAGAGACCTCCACTCTCACATATGGCTTCTTGATGTTAAGAACTTTATTAAGTCATATTCTTAAGCCAAAAATCAAATTGGCCCAATACCAAGATCCGTTCTTTCTCAACAATTTTCTTTTGTTTAATAACGAAAGAAACTTTTATAGCTTCTCTTTTGACCCTGTTGGCTGGATATGGTTAAAGTGAAACTCAGTTTTTTTTTCAGCATATTCAAATTCATGCTCAATTTATGAATATGGGAAACTCATGTCTACTAGAAATAGCTTTTGGATTATTTTTGTTTATGTCGGTAATGCTGATTATGAGAGACACATTTTATGGAAGGAGCGCCCATAAATTGCTGAAATTCTGGATGAGCCCTAGGCCATACTTGGGGACTTCAACTGTATTAGGTACTCTAAAGAAAAGGTTGGGGGACCTTCACCTCCCATTCAGAAGCTTGATTCATTTAATTTTTTATTGCTGACTCTAGGTTGTTTGAGCTTCAAGCCGCTGGGCCTAATTTCACTTGGTTTAATCAGTAGAAAGCTAACCCAATTTATGCGAAACTGAATACGATATTGTGTAATTTGTTGTGGTTCAACTAATTTCCTAGTTCTTAAAAAGTGTTGCCCCCGACACCTCTGATCATGACCTCCTTCACCTATCTTCCTCTATGCCTTTGGGAAAGGTTTTGCTTTAAAAACTATTGGCCAAGCTGTCGGGTTTTGATGACATTATTTGCGATTTATGGTTACAAAATCATGTGGGCAAGCCCATAAATATTTTTCTTAACGTTTTCAAGGCAACTAAAGTCTGGGAATGCACATCTCTTGAGAGGGAATCAAATATAGATTCTTATCTGGTTGGTCTTCGAAACTGTCAACTCCTATCCAATAATCTAAGATTGAACTCAAATGATCCAATTGGGAATGCAGAGATGATCCAATTTACTCATGCTTTAGTTTATGAATATTTTAATAACTTTAGCTGGGCTGTTCAAAGGGCTAAGGTTCATTGACTCAAGCAGGGACAAACTGATCTAAAATTCTTATTTTCTCATATCAATTTGCAGAAAAACAGAAATATTATGTTTTTACTACAATTGATGTTCCTCTGCTGGTCCATGCTATTAGGTACTTTTAACTTGTATAATTCAAATTGCAATGTTGATGTTGAATCGGGGCCCTGTCTAACTGGTGTTCCTGCCGAAGACTTGTCGTCTATTGTTCATACTCTCTCAGTGGTAGAGATTAAACGTGTCATTTTTAGTTTTAACAAAAACTCATTTCCTGGTCCAGATGGACTCAATTGATATTTCTATCAAGTTATTTGGAACGAGATGGGTCCTATGGTGCTTCAAGCCATTTAGAATTTTTTTGTTACTAGCCAAATGCCAAGATGGCTGGCACATTCTGCCATATCTCTCAGTTCCAAAAGCAAACAAATCTAATTCTATCCAAGATTATAGGCCTATTTCTCTTTAATCTCATTTATAAAACAATTGCCAAGATTATTGCAGGTCGAGTGGCTCTTTTACTGCCCAAACTCATTAACTCGGCTCAATTTGGTTTTATAAAAGGGAGGTCTGCGTCAGATAATATTATTATGGCTAATGCTGTCCTTCAGGATTTCAACTCTTAGAAAAATCCTTTTTTGCGCAAATATCATCTTCGAAAAGCTTTTGATATGTATGTTAATAGAGATTACATTATCTCTAGGCTTCACAAAATGCGTTCTCCAACTATTATTTTCCAACTGGTGGCAAGTAATGTTCGGTCCCTCGACTCTCCATGCCTGGAGAATTTCTTCCCTCCTTGCTTTTGTCAAAAGTCTTCTTAACATTGCTAATAGTATGCTATCTACGCTCTCTTTACATATGCTCTCTGATGGAACTTTCAATATCAAATTTGAAGGTCTGGATTCCTTTACTCTTGCAAAAGCTAAGGGTGTGCTACAATCATTTGGCTGTCATTAATTGACACAAAAGTATTTGGTTTAAAGGTAATATTGCGTTATGTGCTAGCTACATGGAAAGGATTCATGAATGGTTACAAAACAGCAGATGTCTTATGTGCTAGAGTCTTAAAAGCGTCCTTCCCTTTCAACACCGGCTGTCGTATAGTTAGATCCTTTGATATTCAGCATTAAACTTTGGCAAATGGGGTGTTAAATTATTGTTGCTAACTGTGAGATTGGTGATCTATGAACTTTGGAACGAGCGTAATTATAGAAGATTTCAAAATCGCTTTCGGTTCCCTTAAACCCTTGACATTACTTGCTGCCGCAATTTTAAGTTTATTGCCTCTTCTTGGTTGTCTGCTCTATGGTTATGGGACTTTGGAAAGCTGTCTTTAGTTTTGTCCTATGAATGTGATGTCTTCGCTTGAGGGTAATTGGGGCTGTTGCATCAGGTGACATTGTTCATTTCTCTACTTATCTATATGCAGTTTTCTACTTGGGATATTTTTGAGTTACCTCTGGCTTTTATCAATCTCTTTTTTATATTATTCGGCTGGTGGAGTTACTATCCATGGCTTCGTTGCTCTTATCATTTCATGTTGCTGAAGATTTTCTGAATAGATTGTGGAGAAATAGTTTTGTGGCTATTTGCATAACTCAGGACTGTTTCCTCATACATTATGAGGTTAATCTTTTTGATCTTTGATGAGGTTATATGGCTGAAGGTTCTTGAAATACTGGAGGTTTTCATTTGCTCTAAATTTTTTTTCGGTCTACAAGCAAAATTTGCTGGGTGAAGATGTTCTGGAACCTCCACAATGCAGGAATTTTACTCTCCGGATTCGAGAACATTTGGTCATGATTGGGAGCATTAAAACGTTTGTTTTCTGGCGTTTGCTATAGTTATTCAACTTTATTCAAATCTTTATGGCTTTATATGTCCCTCGAAGAAGATTTTTGGACCAAGAAGGAAGTTGACAATTTTGGGGCCATATTTTTTGGCACAGATAGCTTGCTCACTGATCTAAGCCACCTTAAATAGATACTTCTACTGGATACTTCTAGAGCAAGCAACTCCAGAGAGTCGCCCCCCAGGCTTAGATTCTTGATTTCCTAGTTTTGATTTTATAAGATGTGTTGTATATATTATCTTGTTTAGGGTTTAGCTATTCTGTTGTACCCAACTCTATTTTTTCTAATTTAAAGGGCTAACCCTCTTTTCAATTAAATTTATAATTTTATATTTAAAAATTATCACATTATCAATATAGCTTTTATCTAATCCAATTGTATGTAAAATTTTTCAACAAAGTTTTATCATGATTATTGGAATGGTGCCTTTTATAAGAGAAACATCACAATTTAAATAAAATTTCCTTGCAGTGCTGAGGTAATGAAACCAAGATGAAAGATAGGGGAGTCATTTGAGAGGAAATTAATTATTTAGAAAATTAATGTCATTACTGTTTTAAAAAAATTTATATAAATATATTATCGAAGAAATTGAGCTCAATATGACATTTGGCAGTGAATTTTGAATTTTTGTATATCAAGAGTTTAAAC

Network for GWHGAAEX013962

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX013962
PTKVYSTLHIKLIHIYIFSNSSNSISNNFILRLSFCSRSSFGSRKNRRVFLHCKWRPFSSGATAASTHTKSLLCYISFVFTPRSYFAKTSSINWKSLFSSRDYALTLLSPSFTGMSISTSSNMDKLSHRLFSWENTLLQSSSSHDQTLEAKRLLLPLHNVGWFLFSDSPVLRMNGIVLSGSPCFFYFNVPFIRPWTRFCSVSNIFLFLPLKIKFGSGLLLVGYVWRLINSATLLDSLKLPSMERQLLNQFFTIGSPNVARFAIILSCCMLCTCPGYSLEKKSYQKKSEDLFCLTKLCTPLTAQQPDYATLFQLPYLPFRSPLLTFRSPPNPPAVSNPNSTPSPQTRSPIKMPNATDNVISCPVPTNPSLHSPIVTSPPASIIPPSSIIPPSSNSPTNWSISSTTNNAQTKGKIASLEARFLFSIFYISYKACYCFLLPISLLLDVRDLHSHIWLLDVKNFIKSYSAKNQIGPIPRSVLSQQFSFVRKKLLLLFPCWLDMVKVKLSFFFSIFKFMLNLIWETHVYKLLDYFCLCRCLETHFMEGAPINCNSGALGHTWGLQLYVLRKGWGTFTSHSEAFIFFIADSRLFELQAAGPNFTWFNQKANPIYAKLNTILCNLLWFNFPSSKVLPPTPLIMTSFTYLPLCLWERFCFKNYWPSCRVLMTLFAIYGYKIMWASPIFFLTFSRQLKSGNAHLLRGNQIILIWLVFETVNSYPIIDTQMIQLGMQRSNLLMLFMNILITLAGLFKGLRFIDSSRDKLINSYFLISICRKTEILCFYYNCSSAGPCYVLLTCIIQIAMLMLNRGPVLVFLPKTCRLLFILSQWRLNVSFLVLTKTHFLVQMDSIDISIKLFGTRWVLWCFKPFRIFLLLAKCQDGWHILPYLSVPKANKSNSIQDYRPISLSHLNNCQDYCRSSGSFTAQTHLGSIWFYKREVCVRYYYGCCPSGFQLLEKSFFAQISSSKSFYVCRLHYLASQNAFSNYYFPTGGKCSVPRLSMPGEFLPSLLLSKVFLTLLIVCYLRSLYICSLMELSISNLKVWIPLLLQKLRVCYNHLAVINHKSIWFKGNIALCASYMERIHEWLQNSRCLMCSLKSVLPFQHRLSYSILYSALNFGKWGVKLLLLTVRLVIYELWNERNYRRFQNRFRFPTLDITCCRNFKFIASSWLSALWLWDFGKLSLVLSYECDVFAGLGLLHQVTLFISLLIYMQFSTWDIFELPLAFINLFFILFGWWSYYPWLRCSYHFMLLKIFIDCGEIVLWLFALRTVSSYIMRLIFLIFDEVIWLKVLEILEVFICSKFFFGLQAKFAGRCSGTSTMQEFYSPDSRTFGHDWEHNVCFLAFAIVIQLYSNLYGFICPSKKIFGPRRKLTILGPYFLAQIACSLIATLNRYFYWILLEQATPESRPPGLDSFPSFDFIRCVVYIILFRVLFCCTQLYFFFKGLTLFSIKFIILYLKIITLSILLSNPIVCKIFQQSFIMIIGMVPFIRETSQFKNFLAVLRNQDERGSHLRGNLFRKLMSLLFKNLYKYIIEEIELNMTFGSEFIFVYQEFK

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.250
SRP064423	SRR2545915	Juvenile tuber	0.670
SRP108465	SRR5643513	five period of Gastrodia elata	0.640
	SRR5643514	five period of Gastrodia elata	0.770
	SRR5643515	five period of Gastrodia elata	0.190
	SRR5643524	five period of Gastrodia elata	0.280
	SRR5643525	five period of Gastrodia elata	0.250
	SRR5643528	five period of Gastrodia elata	0.060
	SRR5643658	five period of Gastrodia elata	0.200
	SRR5643659	five period of Gastrodia elata	1.680
	SRR5643660	five period of Gastrodia elata	2.530
	SRR5643661	five period of Gastrodia elata	1.420
	SRR5643662	five period of Gastrodia elata	0.620
	SRR5643663	five period of Gastrodia elata	1.180
	SRR5643664	five period of Gastrodia elata	0.740
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.530
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.290
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	2.020
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.570
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.130
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.000
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.370
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.360
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.630
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.270
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.270
SRP279888	Gastro	Gastrodia elata tuber	2.06
	Juven	Juvenile tuber	2.68
	Mother_Gastro	Mother tuber of Gastrodia elata	0.21
	Mother_Juven	Mother tuber of Juvenile	0.74