Detail information of GWHGAAEX013965/evm.TU.scaffold_54.197


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|268317221|ref|YP_003290940.1|4.00E-68protoporphyrinogen oxidase [Rhodothermus marinus DSM 4252]
KOGKOG12765.00E-145Protoporphyrinogen oxidase
nrgi|672121015|ref|XP_008783797.1|0PREDICTED: protoporphyrinogen oxidase, mitochondrial isoform X3 [Phoenix dactylifera]
Swissprottr|Q94IG7|PPOCM_SPIOL3.00E-157Protoporphyrinogen oxidase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|M0RIS9|M0RIS9_MUSAM7.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P16540_001}
TAIRAT5G142205.00E-145Flavin containing amine oxidoreductase family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005950658415104907+
Transcript Sequence

Network for GWHGAAEX013965

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01593.23Amino_oxidase223703.80E-45
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00231PPOX, hemY Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Porphyrin and chlorophyll metabolismmap00860

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006779Biological Processporphyrin-containing compound biosynthetic process
GO:0016491Molecular Functionoxidoreductase activity
GO:0004729Molecular Functionoxygen-dependent protoporphyrinogen oxidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.700
SRR2545915Juvenile tuber27.250
SRP108465SRR5643513five period of Gastrodia elata9.050
SRR5643514five period of Gastrodia elata9.660
SRR5643515five period of Gastrodia elata8.670
SRR5643524five period of Gastrodia elata9.930
SRR5643525five period of Gastrodia elata10.260
SRR5643528five period of Gastrodia elata9.710
SRR5643658five period of Gastrodia elata12.960
SRR5643659five period of Gastrodia elata9.800
SRR5643660five period of Gastrodia elata14.010
SRR5643661five period of Gastrodia elata10.920
SRR5643662five period of Gastrodia elata11.840
SRR5643663five period of Gastrodia elata13.190
SRR5643664five period of Gastrodia elata11.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.000
SRR6049655Rhizomagastrodiae_C368-T10_good_19.040
SRR6049656Rhizomagastrodiae_C368-T07_good_111.930
SRR6049657Rhizomagastrodiae_C368-T07_good_113.150
SRR6049658Rhizomagastrodiae_C368-T04_good_19.850
SRR6049659Rhizomagastrodiae_C368-T04_good_110.250
SRR6049660Rhizomagastrodiae_C368-T01_good_111.240
SRR6049661Rhizomagastrodiae_C368-T04_good_17.960
SRR6049662Rhizomagastrodiae_C368-T01_good_19.600
SRR6049663Rhizomagastrodiae_C368-T01_good_18.630
SRR6049664Rhizomagastrodiae_C368-T10_good_110.590
SRR6049665Rhizomagastrodiae_C368-T10_good_110.590
SRP279888GastroGastrodia elata tuber 15.35
JuvenJuvenile tuber13.12
Mother_GastroMother tuber of Gastrodia elata 7.46
Mother_JuvenMother tuber of Juvenile 7.70