Detail information of GWHGAAEX013966/evm.TU.scaffold_54.198
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383457652|ref|YP_005371641.1| | 2.00E-115 | putative aminopeptidase 2 [Corallococcus coralloides DSM 2259] |
| KOG | KOG2596 | 0 | Aminopeptidase I zinc metalloprotease (M18) |
| nr | gi|672174962|ref|XP_008807558.1| | 0 | PREDICTED: probable aspartyl aminopeptidase isoform X2 [Phoenix dactylifera] |
| Swissprot | tr|B9RAJ0|DNPEP_RICCO | 0 | Probable aspartyl aminopeptidase |
| trEMBL | tr|M0T6E1|M0T6E1_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P12430_001} |
| TAIR | AT5G60160 | 0 | Zn-dependent exopeptidases superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000059 | 5107110 | 5139818 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013966
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02127.14 | Peptidase_M18 | 14 | 470 | 1.70E-161 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0004177 | Molecular Function | aminopeptidase activity |
| GO:0008270 | Molecular Function | zinc ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 106.120 |
| SRR2545915 | Juvenile tuber | 67.090 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 36.540 |
| SRR5643514 | five period of Gastrodia elata | 38.000 | |
| SRR5643515 | five period of Gastrodia elata | 38.440 | |
| SRR5643524 | five period of Gastrodia elata | 36.040 | |
| SRR5643525 | five period of Gastrodia elata | 37.460 | |
| SRR5643528 | five period of Gastrodia elata | 37.890 | |
| SRR5643658 | five period of Gastrodia elata | 39.660 | |
| SRR5643659 | five period of Gastrodia elata | 45.460 | |
| SRR5643660 | five period of Gastrodia elata | 46.960 | |
| SRR5643661 | five period of Gastrodia elata | 49.710 | |
| SRR5643662 | five period of Gastrodia elata | 45.810 | |
| SRR5643663 | five period of Gastrodia elata | 45.520 | |
| SRR5643664 | five period of Gastrodia elata | 51.310 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 75.070 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 52.300 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 62.090 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 97.090 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 155.890 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 169.180 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 105.310 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 116.390 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 58.460 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 68.870 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 44.460 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 44.460 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 67.96 |
| Juven | Juvenile tuber | 52.82 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 52.81 | |
| Mother_Juven | Mother tuber of Juvenile | 46.87 |