Detail information of GWHGAAEX013975/evm.TU.scaffold_54.210


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|111019387|ref|YP_702359.1|3.00E-28NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Rhodococcus jostii RHA1]
KOGKOG27112.00E-147Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase
nrgi|743765407|ref|XP_010912925.1|1.37E-165PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] isoform X1 [Elaeis guineensis]
Swissprottr|P52425|GPDA_CUPLA1.00E-148Glycerol-3-phosphate dehydrogenase [NAD(+)]
trEMBLtr|J3L8A5|J3L8A5_ORYBR7.00E-158Glycerol-3-phosphate dehydrogenase [NAD(+)] {ECO:0000256|RuleBase:RU361243}
TAIRAT5G406102.00E-147NAD-dependent glycerol-3-phosphate dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005953099535332249-
Transcript Sequence

Network for GWHGAAEX013975

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01210.22NAD_Gly3P_dh_N161065.50E-22
PF07479.13NAD_Gly3P_dh_C1282757.90E-46
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00006GPD1 Biosynthesis of secondary metabolites map01110
Glycerophospholipid metabolismmap00564
MAPK signaling pathway - yeastmap04011

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0046168Biological Processglycerol-3-phosphate catabolic process
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006072Biological Processglycerol-3-phosphate metabolic process
GO:0042803Molecular Functionprotein homodimerization activity
GO:0016491Molecular Functionoxidoreductase activity
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287Molecular FunctionNAD binding
GO:0004367Molecular Functionglycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0009331Cellular Componentglycerol-3-phosphate dehydrogenase complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.730
SRR2545915Juvenile tuber0.250
SRP108465SRR5643513five period of Gastrodia elata1.320
SRR5643514five period of Gastrodia elata1.690
SRR5643515five period of Gastrodia elata1.300
SRR5643524five period of Gastrodia elata1.410
SRR5643525five period of Gastrodia elata1.220
SRR5643528five period of Gastrodia elata0.630
SRR5643658five period of Gastrodia elata0.950
SRR5643659five period of Gastrodia elata0.060
SRR5643660five period of Gastrodia elata0.550
SRR5643661five period of Gastrodia elata1.270
SRR5643662five period of Gastrodia elata0.140
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.320
SRR6049655Rhizomagastrodiae_C368-T10_good_12.200
SRR6049656Rhizomagastrodiae_C368-T07_good_12.210
SRR6049657Rhizomagastrodiae_C368-T07_good_13.210
SRR6049658Rhizomagastrodiae_C368-T04_good_15.700
SRR6049659Rhizomagastrodiae_C368-T04_good_15.470
SRR6049660Rhizomagastrodiae_C368-T01_good_12.310
SRR6049661Rhizomagastrodiae_C368-T04_good_12.560
SRR6049662Rhizomagastrodiae_C368-T01_good_14.100
SRR6049663Rhizomagastrodiae_C368-T01_good_13.780
SRR6049664Rhizomagastrodiae_C368-T10_good_12.350
SRR6049665Rhizomagastrodiae_C368-T10_good_12.350
SRP279888GastroGastrodia elata tuber 0.93
JuvenJuvenile tuber1.97
Mother_GastroMother tuber of Gastrodia elata 8.17
Mother_JuvenMother tuber of Juvenile 6.36