Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG1677	5.00E-27	CCCH-type Zn-finger protein
nr	gi\|22326848\|ref\|NP_568332.2\|	3.02E-25	zinc finger nuclease 3 [Arabidopsis thaliana]
Swissprot	tr\|Q8L7N8\|C3H57_ARATH	2.00E-27	Zinc finger CCCH domain-containing protein 57
trEMBL	tr\|A0A078FHI5\|A0A078FHI5_BRANA	8.00E-25	BnaC09g39260D protein {ECO:0000313\|EMBL:CDY13900.1}
trEMBL	tr\|A0A078FHI5\|A0A078FHI5_BRANA	5.00E-18	BnaC09g39260D protein {ECO:0000313\|EMBL:CDY13900.1}
trEMBL	tr\|A0A078FHI5\|A0A078FHI5_BRANA	5.00E-12	BnaC09g39260D protein {ECO:0000313\|EMBL:CDY13900.1}
TAIR	AT5G16540	5.00E-27	zinc finger nuclease 3

Scaffold	Start	End	Strand
GWHAAEX00000059	5498017	5535029	+

Transcript Sequence
>GWHTAAEX013980 ATGAAAACTGGGTACTGCAAGTTCAAATCGGCATGCAAATATCATCATCCAAAATCAAATCTTTGTATCATTGACCGGCCACCTAGACCTGCAATTAGCAATCATCAATATCTTGAGCCTGTAGAACAATTGTGTTTAACACAATGTCCCTCAGAAAACACTTTGAATGAACAAGCAACCTTTCAAGCTCAATCAACTTTTTTTGTTGAACGTCAGGATATACCTAACCAGCAAATCCAGCCAAATAATGAATGCATTAAAAATCAGGTGGACACAGCTCCATTGCATCTTCCAGAAAAAAAACTAAATGATCAAGGGCAAGAATTAGGTAACAAGTTTAATGTGTTTAAGTTTAATAGTGGTGTGGAGTTTCAACTGTCTGATGAATATCCTCAAAGACCTGATGAACCTGAGTGCCAGTATTTTATGAAAACTGGATACTGCAAGTTCAAGTCAGCATGCCGATTTAATCATCCACATTCAAATCTTCACATCCCAGGAATTCTGCCACAACCTGTAAAGAACAATTATGAGATGGCCACAGGTTCATTGCATGTTCCAGAAATAAAAATGAATGAACATGGGCGAGAATTTGCTAACAAGTGTGTGATAAATGAATTCAGTGGTTGTTTGGAGTCTCAACAATTGGTTGAATATCCTCAAAAGCCAAGTGAACCTGAGTGCCAGTATTTTATGAAAACTGGACATTGCAAGTTCAAATCAGCATGCCGGTACCATCATCCGAAATCAAATTTCAGCCATCTGGAATCACAGATAAAATTTATGCCCACAAATTCATTGCATCTTCTAGAAACAAAAAATGATGAACAAGGGCAAGAATCAGGCAACAACGATGCTCCGTATGAATTCAATGATGGAGGAGAGTCTCAGCAGCCTAATGAATACCCTCAAAGGCCAAGCGAGCCTGAATGCCAGCATTTTATGAAAACTGGATTCTGCAAGTTCAAATCTGCATGCTGATATCATCACGCGCAATCAAATCCTGGCATCTTGAAACCCCCAGAGAAACTGGATAATAAACCTGTATGTGCATATTATGGCCGTCATGGAATTTGCAAGTTTGGCTCCTCTTGCAAATACAATCATCATTTGGAGCGGGGCATAAATTTCTGAACATATGAAGCCAGCAGCATTAGTAGCGCCAGCCCCATCTCATAATATGGCTCCCATTGTATTGATTGAAGAAAAAATTTATGCATTTAAACTTATTAGGCTTTTTGGGTCTGTGAATACTTGCGTTTTATACAAAATTTGTTAATGTTTGTTATTGTGAAAGAAAATTTTTATATATGTAATTTATAGGTTTGTTTTAATATTGTGCAGAATTACTTAGAAATATCATCCGGTGTGAGTATATATATATACC

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module7

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00642.23	zf-CCCH	135	159	1.10E-07
PF00642.23	zf-CCCH	225	249	1.60E-06

Protein Sequence

Gene family	subfamily
Transcription Factors Family	C3H

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0046872	Molecular Function	metal ion binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.600
SRP064423	SRR2545915	Juvenile tuber	2.670
SRP108465	SRR5643513	five period of Gastrodia elata	7.820
	SRR5643514	five period of Gastrodia elata	8.670
	SRR5643515	five period of Gastrodia elata	9.020
	SRR5643524	five period of Gastrodia elata	8.170
	SRR5643525	five period of Gastrodia elata	13.430
	SRR5643528	five period of Gastrodia elata	13.720
	SRR5643658	five period of Gastrodia elata	14.440
	SRR5643659	five period of Gastrodia elata	7.720
	SRR5643660	five period of Gastrodia elata	8.190
	SRR5643661	five period of Gastrodia elata	8.010
	SRR5643662	five period of Gastrodia elata	7.660
	SRR5643663	five period of Gastrodia elata	9.020
	SRR5643664	five period of Gastrodia elata	6.510
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.010
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.810
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.440
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.350
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.050
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.580
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.370
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.040
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.340
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	5.720
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	5.720
SRP279888	Gastro	Gastrodia elata tuber	10.36
	Juven	Juvenile tuber	12.13
	Mother_Gastro	Mother tuber of Gastrodia elata	12.78
	Mother_Juven	Mother tuber of Juvenile	17.10