Detail information of GWHGAAEX013984/evm.TU.scaffold_54.221
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|440681521|ref|YP_007156316.1| | 2.00E-46 | Caffeoyl-CoA O-methyltransferase [Anabaena cylindrica PCC 7122] |
| KOG | KOG1663 | 2.00E-73 | O-methyltransferase |
| nr | gi|700212728|gb|AIU48020.1| | 3.28E-109 | caffeoyl CoA O-methyltransferase [Dendrobium catenatum] |
| Swissprot | tr|P93711|CAMT_POPKI | 1.00E-76 | Caffeoyl-CoA O-methyltransferase |
| trEMBL | tr|A0A097PJ38|A0A097PJ38_9ASPA | 1.00E-109 | Caffeoyl CoA O-methyltransferase {ECO:0000313|EMBL:AIU48020.1} |
| TAIR | AT1G67980 | 2.00E-73 | caffeoyl-CoA 3-O-methyltransferase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000059 | 5636186 | 5637805 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013984
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01596.16 | Methyltransf_3 | 29 | 240 | 7.40E-70 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00588 | E2.1.1.104 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 | ||
| Flavonoid biosynthesis | map00941 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008171 | Molecular Function | O-methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.370 |
| SRR2545915 | Juvenile tuber | 0.680 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 34.550 |
| SRR5643514 | five period of Gastrodia elata | 79.460 | |
| SRR5643515 | five period of Gastrodia elata | 52.460 | |
| SRR5643524 | five period of Gastrodia elata | 58.430 | |
| SRR5643525 | five period of Gastrodia elata | 1.890 | |
| SRR5643528 | five period of Gastrodia elata | 8.490 | |
| SRR5643658 | five period of Gastrodia elata | 2.560 | |
| SRR5643659 | five period of Gastrodia elata | 0.200 | |
| SRR5643660 | five period of Gastrodia elata | 0.930 | |
| SRR5643661 | five period of Gastrodia elata | 0.430 | |
| SRR5643662 | five period of Gastrodia elata | 0.500 | |
| SRR5643663 | five period of Gastrodia elata | 0.220 | |
| SRR5643664 | five period of Gastrodia elata | 0.600 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 49.950 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 37.310 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 35.840 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.690 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 16.880 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 17.890 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 12.520 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 12.750 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 28.190 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 19.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 104.180 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 104.180 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.56 |
| Juven | Juvenile tuber | 0.36 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 15.48 | |
| Mother_Juven | Mother tuber of Juvenile | 3.44 |