Detail information of GWHGAAEX013985/evm.TU.scaffold_54.222
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|440681521|ref|YP_007156316.1| | 2.00E-53 | Caffeoyl-CoA O-methyltransferase [Anabaena cylindrica PCC 7122] |
| KOG | KOG1663 | 1.00E-86 | O-methyltransferase |
| nr | gi|700212728|gb|AIU48020.1| | 4.62E-141 | caffeoyl CoA O-methyltransferase [Dendrobium catenatum] |
| Swissprot | tr|Q9C9W3|CAMT1_ARATH | 4.00E-87 | Putative caffeoyl-CoA O-methyltransferase At1g67980 |
| trEMBL | tr|A0A097PJ38|A0A097PJ38_9ASPA | 2.00E-141 | Caffeoyl CoA O-methyltransferase {ECO:0000313|EMBL:AIU48020.1} |
| TAIR | AT1G67980 | 1.00E-86 | caffeoyl-CoA 3-O-methyltransferase |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000059 | 5655858 | 5657609 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX013985
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01596.16 | Methyltransf_3 | 25 | 237 | 4.00E-79 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00588 | E2.1.1.104 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 | ||
| Flavonoid biosynthesis | map00941 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008171 | Molecular Function | O-methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 131.970 |
| SRR2545915 | Juvenile tuber | 181.340 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 380.480 |
| SRR5643514 | five period of Gastrodia elata | 435.960 | |
| SRR5643515 | five period of Gastrodia elata | 389.510 | |
| SRR5643524 | five period of Gastrodia elata | 470.690 | |
| SRR5643525 | five period of Gastrodia elata | 247.940 | |
| SRR5643528 | five period of Gastrodia elata | 301.410 | |
| SRR5643658 | five period of Gastrodia elata | 257.520 | |
| SRR5643659 | five period of Gastrodia elata | 251.580 | |
| SRR5643660 | five period of Gastrodia elata | 274.780 | |
| SRR5643661 | five period of Gastrodia elata | 271.480 | |
| SRR5643662 | five period of Gastrodia elata | 240.100 | |
| SRR5643663 | five period of Gastrodia elata | 221.330 | |
| SRR5643664 | five period of Gastrodia elata | 249.880 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 286.420 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 386.730 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 319.300 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 208.440 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 232.400 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 227.420 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 208.670 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 214.950 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 294.710 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 296.030 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 453.470 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 453.470 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 351.71 |
| Juven | Juvenile tuber | 371.40 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 376.18 | |
| Mother_Juven | Mother tuber of Juvenile | 306.04 |