Detail information of GWHGAAEX013986/evm.TU.scaffold_543.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|593689392|ref|XP_007145315.1|7.10E-13hypothetical protein PHAVU_007G228700g [Phaseolus vulgaris]
trEMBLtr|V7BHD3|V7BHD3_PHAVU3.00E-13Uncharacterized protein {ECO:0000313|EMBL:ESW17309.1}
TAIRAT3G527901.00E-11peptidoglycan-binding LysM domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000005351043211069-
Transcript Sequence

Network for GWHGAAEX013986

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01476.19LysM53944.60E-05
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.700
SRR2545915Juvenile tuber4.130
SRP108465SRR5643513five period of Gastrodia elata7.580
SRR5643514five period of Gastrodia elata2.920
SRR5643515five period of Gastrodia elata13.330
SRR5643524five period of Gastrodia elata10.060
SRR5643525five period of Gastrodia elata14.030
SRR5643528five period of Gastrodia elata7.360
SRR5643658five period of Gastrodia elata3.870
SRR5643659five period of Gastrodia elata3.550
SRR5643660five period of Gastrodia elata5.700
SRR5643661five period of Gastrodia elata10.630
SRR5643662five period of Gastrodia elata16.830
SRR5643663five period of Gastrodia elata9.740
SRR5643664five period of Gastrodia elata11.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.120
SRR6049655Rhizomagastrodiae_C368-T10_good_136.810
SRR6049656Rhizomagastrodiae_C368-T07_good_114.490
SRR6049657Rhizomagastrodiae_C368-T07_good_19.190
SRR6049658Rhizomagastrodiae_C368-T04_good_110.010
SRR6049659Rhizomagastrodiae_C368-T04_good_113.410
SRR6049660Rhizomagastrodiae_C368-T01_good_111.900
SRR6049661Rhizomagastrodiae_C368-T04_good_118.420
SRR6049662Rhizomagastrodiae_C368-T01_good_115.230
SRR6049663Rhizomagastrodiae_C368-T01_good_115.340
SRR6049664Rhizomagastrodiae_C368-T10_good_114.420
SRR6049665Rhizomagastrodiae_C368-T10_good_114.420
SRP279888GastroGastrodia elata tuber 15.57
JuvenJuvenile tuber1.00
Mother_GastroMother tuber of Gastrodia elata 172.58
Mother_JuvenMother tuber of Juvenile 137.15