Detail information of GWHGAAEX013990/evm.TU.scaffold_55.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG30801.00E-99Nucleolar protein-like/EBNA1-binding protein
nrgi|672119724|ref|XP_008783111.1|3.55E-107PREDICTED: probable rRNA-processing protein EBP2 homolog [Phoenix dactylifera]
Swissprottr|Q9LUJ5|EBP2_ARATH3.00E-100Probable rRNA-processing protein EBP2 homolog
trEMBLtr|W9QN96|W9QN96_9ROSA1.00E-105Uncharacterized protein {ECO:0000313|EMBL:EXB44287.1}
TAIRAT3G226601.00E-99rRNA processing protein-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000568985390659+
Transcript Sequence

Network for GWHGAAEX013990

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05890.11Ebp2132624.80E-67
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms78.310
SRR2545915Juvenile tuber114.670
SRP108465SRR5643513five period of Gastrodia elata99.900
SRR5643514five period of Gastrodia elata81.460
SRR5643515five period of Gastrodia elata77.190
SRR5643524five period of Gastrodia elata91.630
SRR5643525five period of Gastrodia elata72.690
SRR5643528five period of Gastrodia elata73.520
SRR5643658five period of Gastrodia elata56.320
SRR5643659five period of Gastrodia elata111.850
SRR5643660five period of Gastrodia elata117.740
SRR5643661five period of Gastrodia elata127.530
SRR5643662five period of Gastrodia elata138.270
SRR5643663five period of Gastrodia elata119.540
SRR5643664five period of Gastrodia elata111.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_180.400
SRR6049655Rhizomagastrodiae_C368-T10_good_1108.550
SRR6049656Rhizomagastrodiae_C368-T07_good_185.270
SRR6049657Rhizomagastrodiae_C368-T07_good_170.240
SRR6049658Rhizomagastrodiae_C368-T04_good_165.710
SRR6049659Rhizomagastrodiae_C368-T04_good_159.630
SRR6049660Rhizomagastrodiae_C368-T01_good_169.740
SRR6049661Rhizomagastrodiae_C368-T04_good_162.790
SRR6049662Rhizomagastrodiae_C368-T01_good_181.270
SRR6049663Rhizomagastrodiae_C368-T01_good_176.740
SRR6049664Rhizomagastrodiae_C368-T10_good_186.650
SRR6049665Rhizomagastrodiae_C368-T10_good_186.650
SRP279888GastroGastrodia elata tuber 106.62
JuvenJuvenile tuber99.39
Mother_GastroMother tuber of Gastrodia elata 50.46
Mother_JuvenMother tuber of Juvenile 68.22