Detail information of GWHGAAEX014003/evm.TU.scaffold_55.26


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83311573|ref|YP_421837.1|1.00E-19parvulin-like peptidyl-prolyl isomerase [Magnetospirillum magneticum AMB-1]
KOGKOG32595.00E-59Peptidyl-prolyl cis-trans isomerase
nrgi|695051475|ref|XP_009413764.1|8.28E-59PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SL42|PIN1_ARATH1.00E-59Peptidyl-prolyl cis-trans isomerase Pin1
trEMBLtr|M0TRT3|M0TRT3_MUSAM3.00E-59Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P19300_001}
TAIRAT2G180405.00E-59peptidylprolyl cis/trans isomerase, NIMA-interacting 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000056929887941134-
Transcript Sequence

Network for GWHGAAEX014003

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00639.20Rotamase111189.40E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09578PIN1 RIG-I-like receptor signaling pathway map04622

Gene Ontology

GO term OntologyName
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms130.300
SRR2545915Juvenile tuber118.410
SRP108465SRR5643513five period of Gastrodia elata70.100
SRR5643514five period of Gastrodia elata95.150
SRR5643515five period of Gastrodia elata88.030
SRR5643524five period of Gastrodia elata87.170
SRR5643525five period of Gastrodia elata145.370
SRR5643528five period of Gastrodia elata143.980
SRR5643658five period of Gastrodia elata134.110
SRR5643659five period of Gastrodia elata73.750
SRR5643660five period of Gastrodia elata77.090
SRR5643661five period of Gastrodia elata66.150
SRR5643662five period of Gastrodia elata57.740
SRR5643663five period of Gastrodia elata59.780
SRR5643664five period of Gastrodia elata61.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_153.840
SRR6049655Rhizomagastrodiae_C368-T10_good_148.960
SRR6049656Rhizomagastrodiae_C368-T07_good_155.610
SRR6049657Rhizomagastrodiae_C368-T07_good_159.840
SRR6049658Rhizomagastrodiae_C368-T04_good_168.440
SRR6049659Rhizomagastrodiae_C368-T04_good_177.910
SRR6049660Rhizomagastrodiae_C368-T01_good_155.220
SRR6049661Rhizomagastrodiae_C368-T04_good_170.040
SRR6049662Rhizomagastrodiae_C368-T01_good_162.410
SRR6049663Rhizomagastrodiae_C368-T01_good_164.350
SRR6049664Rhizomagastrodiae_C368-T10_good_169.760
SRR6049665Rhizomagastrodiae_C368-T10_good_169.760
SRP279888GastroGastrodia elata tuber 59.01
JuvenJuvenile tuber41.45
Mother_GastroMother tuber of Gastrodia elata 43.23
Mother_JuvenMother tuber of Juvenile 35.84