Detail information of GWHGAAEX014025/evm.TU.scaffold_55.63
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|521464512|ref|YP_008151634.1| | 4.00E-25 | hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2] |
| KOG | KOG1187 | 3.00E-172 | Serine/threonine protein kinase |
| nr | gi|743805181|ref|XP_010927375.1| | 0 | PREDICTED: probable receptor-like protein kinase At5g15080 isoform X2 [Elaeis guineensis] |
| Swissprot | tr|Q9SRH7|Y3130_ARATH | 9.00E-173 | Receptor-like serine/threonine-protein kinase At3g01300 |
| trEMBL | tr|M5VPV1|M5VPV1_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ03327.1} |
| TAIR | AT3G01300 | 3.00E-172 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000056 | 2327664 | 2359047 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014025
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 104 | 380 | 1.40E-48 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 14.020 |
| SRR2545915 | Juvenile tuber | 18.790 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 22.710 |
| SRR5643514 | five period of Gastrodia elata | 32.570 | |
| SRR5643515 | five period of Gastrodia elata | 27.410 | |
| SRR5643524 | five period of Gastrodia elata | 28.960 | |
| SRR5643525 | five period of Gastrodia elata | 50.630 | |
| SRR5643528 | five period of Gastrodia elata | 41.040 | |
| SRR5643658 | five period of Gastrodia elata | 46.950 | |
| SRR5643659 | five period of Gastrodia elata | 20.370 | |
| SRR5643660 | five period of Gastrodia elata | 22.800 | |
| SRR5643661 | five period of Gastrodia elata | 19.390 | |
| SRR5643662 | five period of Gastrodia elata | 18.520 | |
| SRR5643663 | five period of Gastrodia elata | 24.640 | |
| SRR5643664 | five period of Gastrodia elata | 28.910 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.360 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 35.240 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.750 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 20.190 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 20.910 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 24.590 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.570 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 24.300 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 25.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 25.730 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 27.090 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 27.090 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 49.17 |
| Juven | Juvenile tuber | 33.32 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 39.70 | |
| Mother_Juven | Mother tuber of Juvenile | 37.48 |