Gene detail

Detail information of GWHGAAEX014027/evm.TU.scaffold_55.69

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1922	3.00E-143	Rho GTPase effector BNI1 and related formins
nr	gi\|596251006\|ref\|XP_007224656.1\|	2.25E-160	hypothetical protein PRUPE_ppa026144mg [Prunus persica]
Swissprot	tr\|A3AB67\|FH16_ORYSJ	1.00E-147	Formin-like protein 16 (Precursor)
trEMBL	tr\|M5Y2B2\|M5Y2B2_PRUPE	8.00E-161	Formin-like protein {ECO:0000256\|RuleBase:RU361260}
TAIR	AT1G70140	3.00E-143	formin 8

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000056	2529289	2532392	-

Transcript Sequence
>GWHTAAEX014027 AATAATAAATTGAGTGATATATTTAAGCAAAATAAATCTAAATTATCATTTCCTACCCTTATTATCGTTCTCCTTTGGTCTTCCCTTCTCATATCCCACCCAATCCCTCCTTCTTCTTCCTCCTTCACCTCCAATGAATTCAAAGATCCACCGCCATATTCTTCAATCAATCCCTCCGCCCAAACACTCCGACGACAGAAAACTCGCCGCGGCCATCGTCATCACCGCCGCTGCCACCTTCGCCCTCTCTGCCCTCCTCTTCTTCTCCATCTACCACTTCTTCATCGCCAAACGGAGAAGCGCGCAGATCAAGTTCTTCCAGTCCAACCCACTTCCCCCCTTTCCCTCCCCGACTCTCAAACCCACCTCCGCTCGCTGCCATCACTGCAGCGCCCTGTTCAGCCCATCTCTGGAAGACGAGAGCGGACTCCGCTCGTCGGAGAAATCCCGCCGACGGCTGCGCAAGCACCGGCGAAGCAGCCAGAAGGACCCTCTGCTGCCCACCGGCATCGTCAACTCTTCCAATTTTGATCCCGACGCCGTCAACAGCCTGCAGCCCGCTCCTCCGCCTCCTCTGGCGAAGCCTCCCCCGCCGCCGCTGCCGCAGGCAAAACCTCCTCTGCCGCCACCGCCTGCAAAACCTCCGCCTCCTCCCCCTGCGCCCAAGAGGGCCGGCGGCCCGCCGTTGCCGCCAGAATTTTTGAAGAAGTCGGCGGCGGCAGAGGGTGTGATAGGCAAGCCGAAGCTGAAGCCGCTCCACTGGGACAAGGTCATACCTGTGAATGCAGGGGAATCCATGGTTTGGGACAAAATTACGGACGGCTCGCTTGGGTTTAATGACGATCTGTTGGAATCACTGTTCGGGTACAACGCGACAAATCGTCCTCGGCAGGCATCGGCTGGGTCCGGGCTGAGCAGCAGCCCTTCTCCGGGACAAATCCGGCTCCTAGAGCCTCGCAAATCCCAGAACATCGCCATCATCCTGCGCAGCCTCGCCGTGGGCCGCCATGAAATCCTGGAATCTCTCCTCGACGGCCAAGGTCTCCGCCACGAAACCCTAGAAAAGCTCTCTCGCATCGCCCTCACCCCCGACGAAGAATCCCTCGTCCTCTCCTTTTCAGGCGATCCCTCTCAGCTCGCCGACGCCGAGTCCTTTCTCTTCCAGCTCCTCCGCTCCGTCCCCTTCGCCTTCCCCCGCATCTCCGCCCTCCATTTCCGCTCCTCCGTCTACCAACCCGAGATATCCCTCCTCAAAGCCTCTCTCAGAACCCTAGATCTCGCCTGCTCCGAGCTCCGCTCCCGTCCCCTCTTCCTCAAGCTCCTCGAAGCCATTCTTAAGGCGGGGAATCGGATGAACGCCGGCACCGCCAGGGGAAATGCGCAGGCGTTCGATCTCGTCGCCCTCCGCAAGCTCTCCGATGTCAAGAGCACGGATGGGAAGACCAATCTGCTGCACTTCGTGGTGGAGGAGGTCGTCCGATCCGAAGGCAAGCGCTCCGCCTCCGCCAACAGGAGCCAGCCCAGGGAGGAGAGGGAGAAAGAGTACATGACCCTCGGATTGCCCATCCTCAGCGCCCTCAGCACCGACTTCTCCAACGTCAAGAAAGCCGCCGCCATCGATAATGACGCTTTATCTGGAGGATGCTCCTTGCTCGAGGTGCGCCTGGCTGAGATCCGGCGGCTGGTGGAGAGCTGGAAGGAGGACGAGGGCGGATTTGTGGTCGAAATGAAGGATTTCGTTGAAGCTGCGGCCGGAGAGATTGAAAGGGTGAGGGAAGATCAGGGGAAGGTGATGGAGAAGGTCAGGCGGACCACGGAGTACTATCAGCCGGGGGCTACCAAAGAGAAATCTGCCCAGCCCCTTCAATTGTTTCTGATAGTGAGGGATTTCTTGGCGATGGTGGATCAGGCTTGCTACGATATTAGCAAGAATCTTCAGGCGAAGCCGGCGGTGAAGCCCGTGGAGGAAGAAGCGGCGAATCGCCCGTCACCGGCGACGGTGGCAGATGTCGTCTCGCCTGCGTTGCCGATGGAGGAGAAGACTGTAATTAGTTGTAGGTTTCCGAATTTGCCTGCTCGATTTTTGTCTGATAATGCGGTATCATCGTCTTCTGATTTTGATTCAGGGGAGGAAGATGACTTCTGACTTCTCAGATAGGATACCGAGCATGAATTTGTTCAAACGTTTTGGTTGACCAAGTTTGAAAGGAAATCCGATACATATAATTTTAATCTTGTTTATCAAATATTTAATGCTTTGCGACTAAATAAATATTTAAGAAGAAAAATTGTTATCATGCTCTAAAATCTATCTAATTTTTTTTTTAAATTAAGAAAGGAGATAGTAAAAAATGAAG

Network for GWHGAAEX014027

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02181.22	FH2	202	590	1.30E-93

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.840
SRP064423	SRR2545915	Juvenile tuber	2.990
SRP108465	SRR5643513	five period of Gastrodia elata	24.400
	SRR5643514	five period of Gastrodia elata	28.270
	SRR5643515	five period of Gastrodia elata	19.060
	SRR5643524	five period of Gastrodia elata	25.250
	SRR5643525	five period of Gastrodia elata	36.520
	SRR5643528	five period of Gastrodia elata	39.550
	SRR5643658	five period of Gastrodia elata	35.620
	SRR5643659	five period of Gastrodia elata	15.590
	SRR5643660	five period of Gastrodia elata	16.680
	SRR5643661	five period of Gastrodia elata	15.430
	SRR5643662	five period of Gastrodia elata	21.560
	SRR5643663	five period of Gastrodia elata	23.580
	SRR5643664	five period of Gastrodia elata	17.060
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	22.710
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	50.810
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	26.760
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	17.390
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.730
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.730
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	17.950
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	18.110
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	37.110
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	31.950
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	52.550
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	52.550
SRP279888	Gastro	Gastrodia elata tuber	17.78
	Juven	Juvenile tuber	15.01
	Mother_Gastro	Mother tuber of Gastrodia elata	46.19
	Mother_Juven	Mother tuber of Juvenile	66.38