Detail information of GWHGAAEX014040/evm.TU.scaffold_55.106
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|695059377|ref|XP_009418046.1| | 3.08E-168 | PREDICTED: peroxidase 65 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9FJR1|PER65_ARATH | 8.00E-133 | Peroxidase 65 (Precursor) |
| trEMBL | tr|M0U1D1|M0U1D1_MUSAM | 1.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P18240_001} |
| TAIR | AT5G47000 | 3.00E-132 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000056 | 4399913 | 4401660 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014040
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module3 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 45 | 290 | 3.40E-68 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.980 |
| SRR2545915 | Juvenile tuber | 20.670 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 21.160 |
| SRR5643514 | five period of Gastrodia elata | 23.200 | |
| SRR5643515 | five period of Gastrodia elata | 18.140 | |
| SRR5643524 | five period of Gastrodia elata | 12.150 | |
| SRR5643525 | five period of Gastrodia elata | 64.680 | |
| SRR5643528 | five period of Gastrodia elata | 40.790 | |
| SRR5643658 | five period of Gastrodia elata | 42.280 | |
| SRR5643659 | five period of Gastrodia elata | 62.950 | |
| SRR5643660 | five period of Gastrodia elata | 38.580 | |
| SRR5643661 | five period of Gastrodia elata | 56.130 | |
| SRR5643662 | five period of Gastrodia elata | 62.480 | |
| SRR5643663 | five period of Gastrodia elata | 113.270 | |
| SRR5643664 | five period of Gastrodia elata | 53.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 19.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 25.370 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 15.850 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 9.730 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.570 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 5.330 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 8.060 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.230 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 12.180 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 7.350 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 20.940 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 20.940 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 20.97 |
| Juven | Juvenile tuber | 8.81 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 4.46 | |
| Mother_Juven | Mother tuber of Juvenile | 3.65 |