Gene detail

Detail information of GWHGAAEX014052/evm.TU.scaffold_56.5

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2464	7.00E-104	Serine/threonine kinase (haspin family)
nr	gi\|672133743\|ref\|XP_008790505.1\|	0	PREDICTED: serine/threonine-protein kinase haspin [Phoenix dactylifera]
trEMBL	tr\|M0RPF8\|M0RPF8_MUSAM	7.00E-167	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr11P04780_001}
TAIR	AT1G09450	7.00E-104	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000066	397070	402396	+

Transcript Sequence
>GWHTAAEX014052 CAATTTTCTCCCGCCGTTGAACAATAATAGGGTTCAAAACTCGTCCTTATGTAGTTGTAGTTGTAGTTCAAAGTGGTAGTTCAAACTTAAACCCTTATTTCCTACTGTCAAACGGCTACCCCTCCATTCTTTTCCACTATCGAACTCGCGGCATGGAGATTGACATCTCATCGCCAGACACGGAGAGGCCGATGGCCGATGGGGGGAAAAATTGCGGAGACGAGGCCGAAGCTAAAAGAATTCAATCCAATCCATGGAGAAGATGGAATCATGGCCCGCCTAAGAGGACTAGCTGGAATCGATCCCTTTCCACAAGGGGAAGAGAAAGCATAATATTTATTGATGGGCTAGACTTGAATACAAAGCCCAAACAAAGAGGTGGAAGGAAGAAACAAAAACAGAAGAAAGCTCCTGAACAGTTGTATGATTTCAGCAAGGAGAAGGCATATTTTGAAGAGGTTGATGCCTTTGAACTATTAGAGGAAAGCCCTTCTCCTAATAAGTTCACTTGGAAAAAGAGTGCAGATTATGAATGCATAGAGCATGATTTGACTGTCGTTTTGTGTCGGTGGAGGAAATCAAAGCTTTTTTCGAGTTGTCCTTCTTCCTTGCCACTTCTCAAGATAACGGAAATAATACCGCTTACCCCGAGTCACACTACCAGCATTGGTTCTTTCAATTTTAGAGCCGGCCATTCTCTATCACTGATCAGGGAAAAGTTAACTACTGAATTGAGCGAGTGTAAATCTAACAGTGTAATTCAAGATTCAACTAAAGAAGCTCCCCACTCTGAAGTTGCCTCAAATATTACTTCTGAACAAAGGGGTCTTTCTTCAATGAGCGTTAATAAAAGTTTGATTAGAGATTTGAATGCAGATTCAGTCTTATCTTCCTTCAATGCCCTTACTATACAAAAGAAGGCAACCACCAATGATAATTGTGAATCTTCAGTAGCTTTGGTAGATAGAAAAACCTGTATGGTGGCAGAGAAAAGTGACATGAAAGATAAAGGGGCATTATGCCGAGAACCGTGTGCCGGTAAATCACTTACTGCTTTTGAACAGCTCCTCATGGTGTGCAGGCAGTCATCCCCAGTAAAATTATCTGAAGTTTTCTCCAATTATTGTGATGCTAGCAGTGTAACAAAGCTTGGTGAAGGTACCTATGGAGAAGCCTTTAGAGCTGGTAATACTGTGTGCAAGATTGTTCCCATTGATGGTGATTTTGTTGTTAATGGAGAAACCCAGAAGAAATCTGAAGAAGTGTTGGAAGAAGTTTTGCTTTCCTTAACACTAAATTCTTTGAGAGAGCAGAGTGAATATAGTGAAAAGCTCAATTCGTGTGCAAGTTTTATTGAGACCAAAGACTTTCGTGTATGCCAAGGCTTGTACGGTACAAACTTAATCAGAGCATGGGAAAACTGGGATGCAGATAATAACTCTGAAAATGATCATCCTTCTGCATTTCCAGAAGATCAATGCTATATTGTCTTTGTATTAGCCGATGGTGGGAAGGATCTAGAAAACTTTCTTCTTGTAAATTTTAATGAGGTTCGAAGTTTGCTAGCACAGGTTGCCACTGCAATGGCTGTTGCAGAAGTTGCTTGTGAATTTGAACATCGAGATTTACACTGGGGTAACATTCTTTTGCGTCGTGATGATGTTACTATGGTTGATTTCACCCTTGATGGAAAAAAAAAGAGTGTTAATAGCTTTGGGCTGACAATATCTATAATTGACTTCACACTTTCCCGTATTAAAACTGGAGAAGCTGTACTATTTCTCAACCTTTCAGCTGATCCTGAACTCTTCGAAGGCCCCAAAAGAAATGTTCAGAAAGATGAAAGAAGTAACTGGAGAATGCTGGGAAGAAAGCTTTCCAAAGACCAACGTTCTATGGTTAATGTATCTTGTTGACATTTTGGACAAGAAGAAAATCTATGAACGTACATTGAAGGATGAGAGAAATCTTAGGTCTTTTAAAAGGCGTCTTAACAATTATGAATCTGCTAACGACTCTCTATCTGACCCATTCTTAAGTGAATTAGTCATTGACAGGTCCAGCGGGGCCTTATAGAGAAAGAGGACACATGTGAATTTAACTGCACAAATATTGTACACCGACTAATTTATAGCATTCTCTTAAAAGGCGTCTTTGTAGTATTCAAAAATCAATTTAACTTATTTTAGTGAGCCATGAAACTCAACATTTGCATGCATCGATGGGATGTCATTTTATTTTACATCTGCTACATCAATTGCTTAAGGCATTCCAAACCTTGTGGTAATGCTAGTTTTAGTAATACTAAATCTCAC

Network for GWHGAAEX014052

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module6

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12330.7	Haspin_kinase	316	556	4.90E-36

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.690
SRP064423	SRR2545915	Juvenile tuber	5.250
SRP108465	SRR5643513	five period of Gastrodia elata	4.350
	SRR5643514	five period of Gastrodia elata	5.610
	SRR5643515	five period of Gastrodia elata	3.960
	SRR5643524	five period of Gastrodia elata	4.420
	SRR5643525	five period of Gastrodia elata	5.630
	SRR5643528	five period of Gastrodia elata	3.070
	SRR5643658	five period of Gastrodia elata	5.330
	SRR5643659	five period of Gastrodia elata	4.690
	SRR5643660	five period of Gastrodia elata	4.950
	SRR5643661	five period of Gastrodia elata	4.770
	SRR5643662	five period of Gastrodia elata	3.980
	SRR5643663	five period of Gastrodia elata	3.760
	SRR5643664	five period of Gastrodia elata	3.370
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	49.700
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	33.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	55.740
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	50.250
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	99.320
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	103.930
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	76.450
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	104.610
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	83.690
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	106.910
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.240
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.240
SRP279888	Gastro	Gastrodia elata tuber	54.01
	Juven	Juvenile tuber	6.26
	Mother_Gastro	Mother tuber of Gastrodia elata	45.17
	Mother_Juven	Mother tuber of Juvenile	7.47