Gene detail

Detail information of GWHGAAEX014053/evm.TU.scaffold_56.10

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|284035384\|ref\|YP_003385314.1\|	2.00E-33	cytochrome P450 [Spirosoma linguale DSM 74]
KOG	KOG0156	3.00E-130	Cytochrome P450 CYP2 subfamily
nr	gi\|672175452\|ref\|XP_008807778.1\|	0	PREDICTED: premnaspirodiene oxygenase-like [Phoenix dactylifera]
Swissprot	tr\|O81974\|C71D8_SOYBN	4.00E-166	Cytochrome P450 71D8
trEMBL	tr\|I1KKN8\|I1KKN8_SOYBN	4.00E-170	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G20430.1}
TAIR	AT3G26300	3.00E-130	cytochrome P450, family 71, subfamily B, polypeptide 34

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000066	994788	996998	+

Transcript Sequence
>GWHTAAEX014053 ATGGAAACAACAATGATAGCTTCCTTGCTACTCTTGTTCTCTACACTGTTTGCTCTTTTATTACGGAATATTAGGAACCTAAAAGCTTTTCCCGCCGTTAAGCTCCCTCCAGGCCCATCAAAACTCCCCTTCATAGGAAGTTTGCATCATCTTGTCGGGGAACACCCGCACCGAAGATTGCGTAAGCTTGCGAACAAATACGGGCCTTTGCTTCACCTCAAACTTGGAGAGGTAAATTATATTATCATTACATCACCAGAATATGCTGGAGAAGTCATGAAGACCCATGACATCGATTTTGCTTCACGACCAGAATCTCTTGCCACAAAAATACTTTTCTACGATAGCAAAGATATTGGCTTTTCGCCATATGACAAATATTGGTCACAACTAAAAAAGATATGTACAGTTGAATTGCTTAGCAGCAAGCGCGTCGAGTCTTTCGGTTTCATTAGACAGGAAGTAGGAGAGCATCTTGTGGAAAAAATTAACATGACAATGGGATCTCCCGTGAACCTCAGTGAAATATTTTTATCTTTAACAAATACGACTATTTCAAGAGCAGCATTTGGGATGGGGTGCTCACACCAAAACAAATTTAATAAGGCCTTAAAAAAAGCATTACAGTATTTGTCAGGCTTTAATTTTGTTGATTTTTATCCATCATTCAGTTTTCTTGGTGATCTAACTGGCTTTCGAGCTCGGCTGAAGAGTGTGCATCGACAATTGGATGAGATCTTTGATGAGATATTTAAGGATCATCAGGATAAGAACCATAATGAAGATTGTGTTCATGAGGATATTGTTGATACTTTGTTCAAACTCAAAAATCATGGGGAGTTGGATATTTCACTTACAACTAAGAATATTAAAGCGATTATACTGGATATATTTATGGGAGGAATTGATACAACAACTTCCACAATGGAGTGGGCTATGTCAGAGCTCATTCGACATCCTGATATTATGCAAAAGGTTCAATTGGAAGTAAGAAAAGTTTTCGAAGGAAAAGAAAAAGTTGATATGAGAGAGGTTAGCAAGCTTCCATACTTAACTCAAATTGTTAAAGAAACCTTGAGATTGCACCCGATACTTCCTTTCTTGATTCCAAGGATATCTCGTAACTCAGTTGAAATTGGTGATTACACAATACTAGTCGGAACACGAATTATTATAAATGCATGGGCAATAATGAGGGACCCAAAATATTGGGTTGATCCAGAGAGATTTCGACCAGAGCGATTTGACGAGACAACATTAGATTTTAAAGGGTCTAAATTTGAGTATATTCCTTTTGGTTCTGGACGGAGAATGTGCCCGGGCATAACTTTTGCAACAGCAGGTATAGAGTATTGGCTTGCACAACTACTTTTTCACTTTGATTGGAAGCTCCCTAATGGCAAGACGCCTGAAGAATTAGATATGGATGAAAATTTTGGTTTAACAGTTTCAAGGCAAAATAACTTATTACTGCTTGCCACTCAGCATAAACATTCTCCTCCAATTAAATAAGTGGTGCTCCTGATGATGAAGATATTATTAAGAAATTTTATAAATATTATAATTTAATCTTGTATATCTATTTAAGTTAATATGTTTTTATAATTAAACTTCCCTTAATGTTTTTTTCCTAATGCATTATTAAGAATATTTATATAATTGGGTATCCATATTTGCATAGATTAAAATGTAACTCAACTATCAAAATCCTTTTCAATTTTGAGTTAATAAATATGGACAGAAAGGAGGGATGGCCATGACTAAATTTTCTTGACTTAAGTCACTATGAATAGAATAATAATATTTTTTTAAGTC

Network for GWHGAAEX014053

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.21	p450	36	482	4.80E-106

Protein Sequence

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP71B34

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	Biological Process	oxidation-reduction process
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	Molecular Function	iron ion binding
GO:0020037	Molecular Function	heme binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	24.700
SRP064423	SRR2545915	Juvenile tuber	7.150
SRP108465	SRR5643513	five period of Gastrodia elata	79.400
	SRR5643514	five period of Gastrodia elata	66.750
	SRR5643515	five period of Gastrodia elata	19.140
	SRR5643524	five period of Gastrodia elata	46.390
	SRR5643525	five period of Gastrodia elata	0.000
	SRR5643528	five period of Gastrodia elata	0.090
	SRR5643658	five period of Gastrodia elata	0.000
	SRR5643659	five period of Gastrodia elata	9.390
	SRR5643660	five period of Gastrodia elata	9.080
	SRR5643661	five period of Gastrodia elata	7.580
	SRR5643662	five period of Gastrodia elata	3.830
	SRR5643663	five period of Gastrodia elata	1.830
	SRR5643664	five period of Gastrodia elata	2.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	80.630
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	318.080
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	167.930
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	116.380
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	60.050
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	56.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	105.770
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	145.110
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	112.290
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	40.650
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	160.590
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	160.590
SRP279888	Gastro	Gastrodia elata tuber	6.95
	Juven	Juvenile tuber	108.86
	Mother_Gastro	Mother tuber of Gastrodia elata	0.17
	Mother_Juven	Mother tuber of Juvenile	25.64