Gene detail

Detail information of GWHGAAEX014054/evm.TU.scaffold_56.11

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672133741\|ref\|XP_008790504.1\|	2.22E-126	PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Phoenix dactylifera]
trEMBL	tr\|A0A059AYC4\|A0A059AYC4_EUCGR	2.00E-116	Uncharacterized protein {ECO:0000313\|EMBL:KCW58666.1}
TAIR	AT5G26770	8.00E-94	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000066	1050786	1065426	-

Transcript Sequence
>GWHTAAEX014054 TTGCTTCAGTCATCCAAGGTCATTTTTCTTCTCCATTATCCTCTTCTAACTTCTACACGATTCGATTCAGCCCTTCCATAAAACCCTGAAGCGTCCCTTTCAGTCCATCTTTATCTGCTCATTCAAGGTGAAAATATATTCTTTTAAAGCTTGGAGTGAAGACGTGCCTCGGATTTGTACCGAAATATTAGTGTGATGCTTTGATTTGCCCGTTTCCTGTGCTCCGCATCGAGTGAAGTGATAAAATCAAGAACCCTTATCTGCAAGCAGCGAAGAGCTTCCCTGGGTTCTTGCATCATTTAGCGTTACACACTTTAGAGAGTTGGAAAAAAATCCGGATTTGGAAGGACGGATGGACACGATTCTGCTGCTATGTATTTAAATGCAGGGATGCAGGCGTTGGGGATGCGGAGTTGGTCAACTGACAATGTTCTTCTTCTGATAAAGCTTCCAATATTTTTAAGTTGGCGATTGTGGTTCAAAAGATGTTTACTTCTGCAAGAAACAGAGCTTAAGGAAACTCGGAATCGATTGGCACTACAAGAGGACTCGTTTTTCAAAGAGACGCAATCAAGACAGGCAGCAGAGGCGAAAGCTAGGAACTTGGAGGAGGATATTGATACCCTGCAGAAATGTTTGAGTGAGAGAGATTTTGAGCTGACTGCATCTTTCTTGGCCAGTGAGCAGTACTTGAAGGAGTTGGATGATCTTAGATCAAAGCTTTTTGTTACCAATGCTACTGCTGAAGCCAGTGCTGCATCAGCACAATCTGCACAGTCTCAGTGTTCATCCTTGCTAAAAGAGTTGGATGAGAATAATTGTTGTGTAAAAGAAAATGAGATTCGTATCATTGATTTAGGCAAGCAGTTGGATCAACTACAAAGGAATTTTGAAGATAGAGAGCTTTCTCAGAAACAATTGAAAGTGCATGTTTTGAAAATGGAAAAGGAAATCCAGATTGCAGCTGCAAAAGCTGGAGAAAACAGAGATTGTGAACTTAGAAGGATTATAAATGAAATTTCTATAAGGAACTATGAAAAGGTAAACAAACTTCTAATTGCAAAGGATGATGAGATCTCTCGGCTTAGGGATGAGATATGCTTCTTGTCTGCACAATGGAAACGCAAAACAAAAGAATTTGAATCTCAGCTTGAAAAGCACAGGAAAGCTGACCAGGAGCTAAAGAAGAAAGTGCTGAAGCTGGAGTCCTGTCTACAGGAAACAAGATCTCAGATGCGGAAGCTTCAAAGGATGGGAGAGAAAAGGGAGATAGCACTCAAGGAACTTAGAGAAGAGATTGTTTCAAAGCAGCAGAACGGTGAGATTTCTAACGAGAAACAAAACTTCTGGGAGAGTTCTGTGTTCAAGGTTTTTATTTCCATGTCCATGTTAGTTTTGGTTGCAGTCGCAAGGCGTTAAATCTCCAAAGCTGTAGAATCTAGTCTGTAGATATTAAGATACTATACTAGCATGGTAGTCATCTTAGTACTTTATGTATGACTGTTTTGTTCAAGGGTTCTTTGTATTTTCTTTCTTGAAGAAGAATTTCATATATATATATGAAAATGATAAATCTTCAAAAATTAGTAAAAAAAAAGTAATGAGAACTAATAGAATTTTTTTTTTTTTT

Network for GWHGAAEX014054

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	27.520
SRP064423	SRR2545915	Juvenile tuber	18.780
SRP108465	SRR5643513	five period of Gastrodia elata	4.430
	SRR5643514	five period of Gastrodia elata	3.830
	SRR5643515	five period of Gastrodia elata	1.900
	SRR5643524	five period of Gastrodia elata	3.050
	SRR5643525	five period of Gastrodia elata	1.630
	SRR5643528	five period of Gastrodia elata	1.000
	SRR5643658	five period of Gastrodia elata	0.680
	SRR5643659	five period of Gastrodia elata	2.520
	SRR5643660	five period of Gastrodia elata	4.830
	SRR5643661	five period of Gastrodia elata	3.650
	SRR5643662	five period of Gastrodia elata	1.860
	SRR5643663	five period of Gastrodia elata	0.510
	SRR5643664	five period of Gastrodia elata	2.670
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.030
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.280
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.740
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.030
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.260
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.590
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.870
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.440
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.710
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.770
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.770
SRP279888	Gastro	Gastrodia elata tuber	4.80
	Juven	Juvenile tuber	0.94
	Mother_Gastro	Mother tuber of Gastrodia elata	0.36
	Mother_Juven	Mother tuber of Juvenile	0.57