Detail information of GWHGAAEX014065/evm.TU.scaffold_56.29


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006619045881919846-
Transcript Sequence

Network for GWHGAAEX014065

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K12581CNOT7_8, CAF1, POP2 RNA degradation map03018

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.670
SRR2545915Juvenile tuber1.340
SRP108465SRR5643513five period of Gastrodia elata0.280
SRR5643514five period of Gastrodia elata0.210
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.940
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.430
SRR5643659five period of Gastrodia elata0.450
SRR5643660five period of Gastrodia elata1.240
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata1.270
SRR5643663five period of Gastrodia elata0.380
SRR5643664five period of Gastrodia elata0.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.790
SRR6049655Rhizomagastrodiae_C368-T10_good_10.340
SRR6049656Rhizomagastrodiae_C368-T07_good_11.760
SRR6049657Rhizomagastrodiae_C368-T07_good_11.130
SRR6049658Rhizomagastrodiae_C368-T04_good_11.100
SRR6049659Rhizomagastrodiae_C368-T04_good_11.290
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_11.200
SRR6049662Rhizomagastrodiae_C368-T01_good_11.580
SRR6049663Rhizomagastrodiae_C368-T01_good_11.770
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 1.35
JuvenJuvenile tuber0.87
Mother_GastroMother tuber of Gastrodia elata 1.57
Mother_JuvenMother tuber of Juvenile 0.60