Detail information of GWHGAAEX014072/evm.TU.scaffold_56.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|320159648|ref|YP_004172872.1|6.00E-114methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase [Anaerolinea thermophila UNI-1]
KOGKOG00894.00E-162Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase
nrgi|672176637|ref|XP_008808389.1|0PREDICTED: bifunctional protein FolD 4, chloroplastic isoform X1 [Phoenix dactylifera]
Swissprottr|O65271|FOLD4_ARATH1.00E-162Methenyltetrahydrofolate cyclohydrolase (Precursor)
trEMBLtr|M0RXW7|M0RXW7_MUSAM2.00E-179Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P07590_001}
TAIRAT4G006204.00E-162Amino acid dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006621821992209729+
Transcript Sequence

Network for GWHGAAEX014072

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00763.22THF_DHG_CYH591757.10E-42
PF02882.18THF_DHG_CYH_C1783442.60E-70
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0004488Molecular Functionmethylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms60.020
SRR2545915Juvenile tuber53.460
SRP108465SRR5643513five period of Gastrodia elata46.050
SRR5643514five period of Gastrodia elata49.380
SRR5643515five period of Gastrodia elata47.280
SRR5643524five period of Gastrodia elata53.630
SRR5643525five period of Gastrodia elata72.110
SRR5643528five period of Gastrodia elata96.140
SRR5643658five period of Gastrodia elata74.010
SRR5643659five period of Gastrodia elata48.180
SRR5643660five period of Gastrodia elata55.050
SRR5643661five period of Gastrodia elata47.560
SRR5643662five period of Gastrodia elata45.340
SRR5643663five period of Gastrodia elata46.930
SRR5643664five period of Gastrodia elata43.330
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.530
SRR6049655Rhizomagastrodiae_C368-T10_good_136.580
SRR6049656Rhizomagastrodiae_C368-T07_good_151.060
SRR6049657Rhizomagastrodiae_C368-T07_good_148.860
SRR6049658Rhizomagastrodiae_C368-T04_good_147.680
SRR6049659Rhizomagastrodiae_C368-T04_good_152.200
SRR6049660Rhizomagastrodiae_C368-T01_good_144.980
SRR6049661Rhizomagastrodiae_C368-T04_good_151.140
SRR6049662Rhizomagastrodiae_C368-T01_good_168.310
SRR6049663Rhizomagastrodiae_C368-T01_good_160.700
SRR6049664Rhizomagastrodiae_C368-T10_good_171.370
SRR6049665Rhizomagastrodiae_C368-T10_good_171.370
SRP279888GastroGastrodia elata tuber 58.93
JuvenJuvenile tuber41.47
Mother_GastroMother tuber of Gastrodia elata 95.30
Mother_JuvenMother tuber of Juvenile 44.46