Detail information of GWHGAAEX014084/evm.TU.scaffold_56.57


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|292493769|ref|YP_003529208.1|2.00E-44hypothetical protein Nhal_3806 [Nitrosococcus halophilus Nc 4]
KOGKOG43915.00E-150Predicted alpha/beta hydrolase BEM46
nrgi|357122012|ref|XP_003562710.1|1.88E-179PREDICTED: protein bem46 [Brachypodium distachyon]
trEMBLtr|M0UTZ7|M0UTZ7_HORVD2.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_14193.1}
TAIRAT5G205205.00E-150alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006626197162661161+
Transcript Sequence

Network for GWHGAAEX014084

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00326.20Peptidase_S91322791.90E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008236Molecular Functionserine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.430
SRR2545915Juvenile tuber19.480
SRP108465SRR5643513five period of Gastrodia elata24.430
SRR5643514five period of Gastrodia elata22.670
SRR5643515five period of Gastrodia elata20.790
SRR5643524five period of Gastrodia elata21.710
SRR5643525five period of Gastrodia elata27.660
SRR5643528five period of Gastrodia elata31.630
SRR5643658five period of Gastrodia elata30.280
SRR5643659five period of Gastrodia elata18.570
SRR5643660five period of Gastrodia elata22.330
SRR5643661five period of Gastrodia elata20.760
SRR5643662five period of Gastrodia elata21.170
SRR5643663five period of Gastrodia elata20.710
SRR5643664five period of Gastrodia elata17.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.940
SRR6049655Rhizomagastrodiae_C368-T10_good_122.260
SRR6049656Rhizomagastrodiae_C368-T07_good_121.540
SRR6049657Rhizomagastrodiae_C368-T07_good_123.010
SRR6049658Rhizomagastrodiae_C368-T04_good_120.010
SRR6049659Rhizomagastrodiae_C368-T04_good_121.140
SRR6049660Rhizomagastrodiae_C368-T01_good_119.460
SRR6049661Rhizomagastrodiae_C368-T04_good_117.660
SRR6049662Rhizomagastrodiae_C368-T01_good_121.850
SRR6049663Rhizomagastrodiae_C368-T01_good_119.610
SRR6049664Rhizomagastrodiae_C368-T10_good_125.700
SRR6049665Rhizomagastrodiae_C368-T10_good_125.700
SRP279888GastroGastrodia elata tuber 21.02
JuvenJuvenile tuber42.61
Mother_GastroMother tuber of Gastrodia elata 38.54
Mother_JuvenMother tuber of Juvenile 39.31