Detail information of GWHGAAEX014087/evm.TU.scaffold_56.60
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|695007570|ref|XP_009390336.1| | 4.92E-152 | PREDICTED: peroxidase 59-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q42517|PERN_ARMRU | 3.00E-128 | Peroxidase N (Precursor) |
| trEMBL | tr|A0A067KDU9|A0A067KDU9_JATCU | 2.00E-147 | Uncharacterized protein {ECO:0000313|EMBL:KDP34262.1} |
| TAIR | AT5G19890 | 5.00E-126 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000066 | 2702090 | 2703635 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014087
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 41 | 310 | 1.50E-71 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0004601 | Molecular Function | peroxidase activity |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.290 |
| SRR2545915 | Juvenile tuber | 2.190 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 24.760 |
| SRR5643514 | five period of Gastrodia elata | 43.750 | |
| SRR5643515 | five period of Gastrodia elata | 23.820 | |
| SRR5643524 | five period of Gastrodia elata | 34.110 | |
| SRR5643525 | five period of Gastrodia elata | 3.100 | |
| SRR5643528 | five period of Gastrodia elata | 1.790 | |
| SRR5643658 | five period of Gastrodia elata | 4.330 | |
| SRR5643659 | five period of Gastrodia elata | 6.160 | |
| SRR5643660 | five period of Gastrodia elata | 11.300 | |
| SRR5643661 | five period of Gastrodia elata | 13.830 | |
| SRR5643662 | five period of Gastrodia elata | 8.900 | |
| SRR5643663 | five period of Gastrodia elata | 7.430 | |
| SRR5643664 | five period of Gastrodia elata | 10.030 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 34.640 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 35.510 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 43.920 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 24.300 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 38.640 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 30.710 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.950 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 17.100 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 31.860 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 15.700 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 58.100 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 58.100 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 24.63 |
| Juven | Juvenile tuber | 7.41 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 3.46 | |
| Mother_Juven | Mother tuber of Juvenile | 1.76 |