Detail information of GWHGAAEX014089/evm.TU.scaffold_56.63
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|118577152|ref|YP_876895.1| | 2.00E-14 | thiol-disulfide isomerase [Cenarchaeum symbiosum A] |
| KOG | KOG1308 | 5.00E-89 | Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein |
| nr | gi|695041564|ref|XP_009408394.1| | 2.77E-167 | PREDICTED: TPR repeat-containing thioredoxin TDX isoform X1 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q8VWG7|TDX_ARATH | 3.00E-141 | TPR repeat-containing thioredoxin TDX |
| trEMBL | tr|M0TE35|M0TE35_MUSAM | 2.00E-155 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P02450_001} |
| TAIR | AT3G17870 | 5.00E-89 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000066 | 2791089 | 2805507 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014089
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00085.19 | Thioredoxin | 286 | 383 | 4.90E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0045454 | Biological Process | cell redox homeostasis |
| GO:0046983 | Molecular Function | protein dimerization activity |
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 71.730 |
| SRR2545915 | Juvenile tuber | 60.590 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 31.000 |
| SRR5643514 | five period of Gastrodia elata | 34.870 | |
| SRR5643515 | five period of Gastrodia elata | 34.820 | |
| SRR5643524 | five period of Gastrodia elata | 35.130 | |
| SRR5643525 | five period of Gastrodia elata | 41.050 | |
| SRR5643528 | five period of Gastrodia elata | 46.800 | |
| SRR5643658 | five period of Gastrodia elata | 44.630 | |
| SRR5643659 | five period of Gastrodia elata | 39.070 | |
| SRR5643660 | five period of Gastrodia elata | 38.560 | |
| SRR5643661 | five period of Gastrodia elata | 37.240 | |
| SRR5643662 | five period of Gastrodia elata | 33.160 | |
| SRR5643663 | five period of Gastrodia elata | 39.070 | |
| SRR5643664 | five period of Gastrodia elata | 38.370 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 42.370 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 63.440 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 49.970 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 52.500 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 64.490 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 77.610 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 57.320 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 60.320 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 45.370 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 55.670 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 52.270 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 52.270 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 50.45 |
| Juven | Juvenile tuber | 44.19 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 43.26 | |
| Mother_Juven | Mother tuber of Juvenile | 40.39 |