Detail information of GWHGAAEX014095/evm.TU.scaffold_56.69


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428207004|ref|YP_007091357.1|2.00E-159hypothetical protein Chro_1978 [Chroococcidiopsis thermalis PCC 7203]
KOGKOG05570Dihydrolipoamide acetyltransferase
nrgi|743883717|ref|XP_010909491.1|0PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [Elaeis guineensis]
Swissprottr|Q9SQI8|ODP24_ARATH0Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic (Precursor)
trEMBLtr|A0A087GYW0|A0A087GYW0_ARAAL0Uncharacterized protein {ECO:0000313|EMBL:KFK35062.1}
TAIRAT3G2586002-oxoacid dehydrogenases acyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006629660682976832+
Transcript Sequence

Network for GWHGAAEX014095

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00364.21Biotin_lipoyl501204.00E-16
PF02817.16E3_binding1651996.30E-12
PF00198.222-oxoacid_dh2414601.20E-62
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00627DLAT, aceF, pdhC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620

Gene Ontology

GO term OntologyName
GO:0016746Molecular Functiontransferase activity, transferring acyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.140
SRR2545915Juvenile tuber13.210
SRP108465SRR5643513five period of Gastrodia elata35.340
SRR5643514five period of Gastrodia elata36.580
SRR5643515five period of Gastrodia elata32.990
SRR5643524five period of Gastrodia elata31.500
SRR5643525five period of Gastrodia elata18.390
SRR5643528five period of Gastrodia elata16.710
SRR5643658five period of Gastrodia elata17.090
SRR5643659five period of Gastrodia elata25.880
SRR5643660five period of Gastrodia elata26.840
SRR5643661five period of Gastrodia elata29.490
SRR5643662five period of Gastrodia elata30.890
SRR5643663five period of Gastrodia elata34.110
SRR5643664five period of Gastrodia elata30.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_153.200
SRR6049655Rhizomagastrodiae_C368-T10_good_197.010
SRR6049656Rhizomagastrodiae_C368-T07_good_157.980
SRR6049657Rhizomagastrodiae_C368-T07_good_136.620
SRR6049658Rhizomagastrodiae_C368-T04_good_134.480
SRR6049659Rhizomagastrodiae_C368-T04_good_119.500
SRR6049660Rhizomagastrodiae_C368-T01_good_132.310
SRR6049661Rhizomagastrodiae_C368-T04_good_137.520
SRR6049662Rhizomagastrodiae_C368-T01_good_164.430
SRR6049663Rhizomagastrodiae_C368-T01_good_139.380
SRR6049664Rhizomagastrodiae_C368-T10_good_164.420
SRR6049665Rhizomagastrodiae_C368-T10_good_164.420
SRP279888GastroGastrodia elata tuber 17.48
JuvenJuvenile tuber33.56
Mother_GastroMother tuber of Gastrodia elata 7.20
Mother_JuvenMother tuber of Juvenile 9.97