Detail information of GWHGAAEX014101/evm.TU.scaffold_56.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|170290521|ref|YP_001737337.1|5.00E-21small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
KOGKOG00751.00E-106GTP-binding ADP-ribosylation factor-like protein
nrgi|743823653|ref|XP_010932585.1|5.15E-123PREDICTED: ADP-ribosylation factor-like protein 8A [Elaeis guineensis]
Swissprottr|P51822|ARF1_DAUCA1.00E-30ADP-ribosylation factor 1
trEMBLtr|B8AI21|B8AI21_ORYSI4.00E-122Putative uncharacterized protein {ECO:0000313|EMBL:EEC73947.1}
TAIRAT5G376801.00E-106ADP-ribosylation factor-like A1A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006630905273119135+
Transcript Sequence

Network for GWHGAAEX014101

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00025.20Arf91787.50E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005525Molecular FunctionGTP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms101.940
SRR2545915Juvenile tuber183.430
SRP108465SRR5643513five period of Gastrodia elata67.800
SRR5643514five period of Gastrodia elata69.200
SRR5643515five period of Gastrodia elata77.390
SRR5643524five period of Gastrodia elata74.880
SRR5643525five period of Gastrodia elata100.800
SRR5643528five period of Gastrodia elata115.360
SRR5643658five period of Gastrodia elata94.390
SRR5643659five period of Gastrodia elata66.860
SRR5643660five period of Gastrodia elata59.600
SRR5643661five period of Gastrodia elata72.210
SRR5643662five period of Gastrodia elata60.960
SRR5643663five period of Gastrodia elata70.630
SRR5643664five period of Gastrodia elata58.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_156.600
SRR6049655Rhizomagastrodiae_C368-T10_good_143.000
SRR6049656Rhizomagastrodiae_C368-T07_good_157.890
SRR6049657Rhizomagastrodiae_C368-T07_good_151.410
SRR6049658Rhizomagastrodiae_C368-T04_good_154.170
SRR6049659Rhizomagastrodiae_C368-T04_good_157.550
SRR6049660Rhizomagastrodiae_C368-T01_good_148.570
SRR6049661Rhizomagastrodiae_C368-T04_good_153.710
SRR6049662Rhizomagastrodiae_C368-T01_good_157.270
SRR6049663Rhizomagastrodiae_C368-T01_good_156.530
SRR6049664Rhizomagastrodiae_C368-T10_good_179.140
SRR6049665Rhizomagastrodiae_C368-T10_good_179.140
SRP279888GastroGastrodia elata tuber 79.36
JuvenJuvenile tuber61.90
Mother_GastroMother tuber of Gastrodia elata 91.25
Mother_JuvenMother tuber of Juvenile 73.04