Detail information of GWHGAAEX014103/evm.TU.scaffold_56.80


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|268318148|ref|YP_003291867.1|2.00E-30thymidine kinase [Rhodothermus marinus DSM 4252]
KOGKOG31254.00E-91Thymidine kinase
nrgi|743879752|ref|XP_010908473.1|1.93E-104PREDICTED: thymidine kinase-like [Elaeis guineensis]
Swissprottr|O81263|KITH_ORYSJ1.00E-99Thymidine kinase
trEMBLtr|A0A067ETL2|A0A067ETL2_CITSI6.00E-104Thymidine kinase {ECO:0000256|RuleBase:RU000544}
TAIRAT5G230704.00E-91Thymidine kinase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006633367653343941+
Transcript Sequence

Network for GWHGAAEX014103

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00265.17TK692462.60E-53
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00857tdk, TK Metabolic pathways map01100
Pyrimidine metabolismmap00240
Drug metabolism - other enzymesmap00983

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding
GO:0004797Molecular Functionthymidine kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.360
SRR2545915Juvenile tuber3.460
SRP108465SRR5643513five period of Gastrodia elata12.090
SRR5643514five period of Gastrodia elata11.690
SRR5643515five period of Gastrodia elata9.110
SRR5643524five period of Gastrodia elata10.650
SRR5643525five period of Gastrodia elata5.920
SRR5643528five period of Gastrodia elata6.580
SRR5643658five period of Gastrodia elata5.360
SRR5643659five period of Gastrodia elata9.400
SRR5643660five period of Gastrodia elata9.390
SRR5643661five period of Gastrodia elata9.560
SRR5643662five period of Gastrodia elata15.510
SRR5643663five period of Gastrodia elata15.070
SRR5643664five period of Gastrodia elata15.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.000
SRR6049655Rhizomagastrodiae_C368-T10_good_111.740
SRR6049656Rhizomagastrodiae_C368-T07_good_112.680
SRR6049657Rhizomagastrodiae_C368-T07_good_111.320
SRR6049658Rhizomagastrodiae_C368-T04_good_19.630
SRR6049659Rhizomagastrodiae_C368-T04_good_15.710
SRR6049660Rhizomagastrodiae_C368-T01_good_18.170
SRR6049661Rhizomagastrodiae_C368-T04_good_19.880
SRR6049662Rhizomagastrodiae_C368-T01_good_117.380
SRR6049663Rhizomagastrodiae_C368-T01_good_110.380
SRR6049664Rhizomagastrodiae_C368-T10_good_118.230
SRR6049665Rhizomagastrodiae_C368-T10_good_118.230
SRP279888GastroGastrodia elata tuber 8.71
JuvenJuvenile tuber6.56
Mother_GastroMother tuber of Gastrodia elata 7.64
Mother_JuvenMother tuber of Juvenile 3.39