Detail information of GWHGAAEX014108/evm.TU.scaffold_56.85


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695046376|ref|XP_009411015.1|2.04E-81PREDICTED: uncharacterized protein LOC103992853 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TKS7|M0TKS7_MUSAM8.00E-82Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P25910_001}
TAIRAT3G077601.00E-73Sterile alpha motif (SAM) domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006633872873419211+
Transcript Sequence

Network for GWHGAAEX014108

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07647.16SAM_226616.30E-07
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms91.930
SRR2545915Juvenile tuber65.990
SRP108465SRR5643513five period of Gastrodia elata145.540
SRR5643514five period of Gastrodia elata137.110
SRR5643515five period of Gastrodia elata110.080
SRR5643524five period of Gastrodia elata116.350
SRR5643525five period of Gastrodia elata200.830
SRR5643528five period of Gastrodia elata162.080
SRR5643658five period of Gastrodia elata132.390
SRR5643659five period of Gastrodia elata182.120
SRR5643660five period of Gastrodia elata149.220
SRR5643661five period of Gastrodia elata157.340
SRR5643662five period of Gastrodia elata167.970
SRR5643663five period of Gastrodia elata185.980
SRR5643664five period of Gastrodia elata177.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1137.810
SRR6049655Rhizomagastrodiae_C368-T10_good_1142.380
SRR6049656Rhizomagastrodiae_C368-T07_good_1161.900
SRR6049657Rhizomagastrodiae_C368-T07_good_1140.020
SRR6049658Rhizomagastrodiae_C368-T04_good_1148.530
SRR6049659Rhizomagastrodiae_C368-T04_good_1154.070
SRR6049660Rhizomagastrodiae_C368-T01_good_1148.460
SRR6049661Rhizomagastrodiae_C368-T04_good_1120.540
SRR6049662Rhizomagastrodiae_C368-T01_good_1115.220
SRR6049663Rhizomagastrodiae_C368-T01_good_1138.000
SRR6049664Rhizomagastrodiae_C368-T10_good_1153.310
SRR6049665Rhizomagastrodiae_C368-T10_good_1153.310
SRP279888GastroGastrodia elata tuber 143.21
JuvenJuvenile tuber180.04
Mother_GastroMother tuber of Gastrodia elata 69.13
Mother_JuvenMother tuber of Juvenile 63.05