Gene detail

Detail information of GWHGAAEX014118/evm.TU.scaffold_56.99

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743861119\|ref\|XP_010943191.1\|	2.24E-65	PREDICTED: uncharacterized protein LOC105060980 [Elaeis guineensis]
trEMBL	tr\|M0SJ09\|M0SJ09_MUSAM	9.00E-53	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P29930_001}
TAIR	AT3G56870	2.00E-29	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000066	3667980	3671418	-

Transcript Sequence
>GWHTAAEX014118 ATGTCTCGCAAATCGCTATCCCGGGGTGGTCGAACAGCACGCCATGAACAAGATTGTGGCAAGCTGGCTGCCGGTCTCTTCTCAACAAGCGGTGCTCAAACTAATGGTTCCTTCTCCAAATGCCGCAGGTCATTGAGGCTCAAAGAATTAAGTGCTATATACGGTGCAGATGGTTCAAATGCTAATATTTTGAGTTCCAAACATCTGCTTGAAACTTCTTTAGATGCATGCTCTTCATCAGTCAGCCCAGTTAAATCAGAAGAGTCATTGTATAATGGCAGCCATGACTCACCAAGGCAAACTAATAATGCCTTTGACAAAGACAGTGACGATGAAAGCAATATCAGTATCACCTTAATGGATCTTGTGGCAAGGTACAAAATTAAAAAGCGCAAAGCATCTGAGAGTAATGAACAAGCAAACGTTGATATTCAAAAAAAGTGCAACGCCCTCGTGATTCCAAATGAAGATGTTGAGTTAGAAGAAACAATCAGCAGCTTTAAAGCAAAGAAAATCAAGTCGTCTCCATCCAGTAAAAAATTAGACAAACTTACTAAAACTTCCCTACAGTCTTTATCAGCCACGAAGAAAACAGTGCATGCATTCTCTTTGGATTCCGTGACTCCAGAAAGAGAGCTAGACGAAGCAGCTTTTAAAGGAGCAGTGTTTCATGATCTTTCATTGGATTCGGAGTTTGGCTCCAGGCATACGATAGATAATGTAAACGCGAAGAGGAAAGAATTTGTGGAACTGACCCCTATTGCTGTAGAAAATCCTGATCCAAGTGTTGTTATCAAGATGGAGGTTGTTGAAACTTGTTTAGATGTGTCGGATGATGGAAACTGTACATTGAATTCTATATGTTTCAGTGAAAACGATATTGATAATGAATCTTTTAACGAAGTTTTCAATAATGTTACTGAAACAGACGATTTGGGGGGGCCTGACAATGTTGTAAGCGACATAAAGGACCCCTTTACTAGAGATACAAAACAATATGAAGATGGTTTTCCTTCTTCAACTTCACCTACATTAGAAAAATATCAAATTCCAATTCATGAAGTGAGCAATATCAAAGACAAACATATGGTTGCTTGTTCTACAGAGTGGGAGTACCAAGCTCCTAATGTGGGTTTGAAGTTTAAACATCACAGAAACGTACATACTGAAGTGTCTCAGAAGGATTGCAAGCATCAACTGCAGTATGAAGAATCAATGTTATTTGATAAAGAAGATATGCCTTTCATAGTTTCTGAAAGTTCCCAAGAGTTCCTCGAATCTGATTGTGCAAAATTGACTAGTTCCTTGGAAAACGATAGATGGTTGAAAGAACATAAAAGGAGCAGTTTTATCGATGAAACTTTTGAAAAAAAAATAGTTTCATTGGTGCCTGAATTCAAAGCTTCTTATAATTGTAAGAAATTTGGTGTGGCAATTGCAGAGTCTGGTGTCTCATTAGGCATAGAAAGCAATGATAATTTTGTAGATGGAATGAAATCTTGCAATGGTGGCTACGTGGATAGAAATTCCTTTTCAGATACCATCAGCAGCCACAAAAATTTGGATCTTGGAAGTGACGGGGATTACAGTATAGCAAATAAGAACTGCAGTGAGTTGAGTAAATCTATGCAGGCTTCAGCTTGCATCTACAAATTCTCCCAAACAGATAGCATCATCTTACCTGATGACACGCTTTTATCTGTGAATGCTCCCTATTCATCAATAGAGGCTAGATCTCCTTATGCAGTTCCAGATTTTAAAGTTGGACAACAAGATTCTCATAATGATGAAGGAGACTCGCATGGTTTTGTCACAACTACAAATTATTTGGTCGATGTTGATGTGTGGGCACCTCAGGCTGACAAGTTGCCACTTTCTACAGAAGTGCTCATGTTAAAAAGTTGCTCAGAGAGGCTGCCATGCTGTGTTAAGGACTCAGAATTAACTGATGCAAAGAGTCCTTGTGAAATTGCTTGTCACTGCCCTACCTCTCAACCGAAGGAGATTGATCCCAGAAATATGAACCATGCTATTAATAATTTTTCAATATCAGAATCCTCCACCATTGAAGAATTTTCTGCCAGTTCTTCTTTAGAGTCTTGTTATCAGGGTTGTGTAGAGAGACAAATAAACATGCAAACAACTGATATAGAAGCAGAAACTAAGTTTGGAGGCAATCGGTTCATGGAAGCAGAGCGTTCCCCAAAAAAGCTTTTATCACATAGAAAGGATATATCTCCGAACTCACAGGAAAAGCTTCTTCGGGCTTTAGATCATGGTGGCTTAGATGATGTTATCAAACTTTCCCACTGTATGAGAAAACTTTGTTTTGATAAAGCTGCTGCAAAGAAGCCATTGTCATCATTTCTTGATAACGAAGAAATCTTCATGGAGACAGAGCGGATGATCAAGAAGCCAAAGAGCACTAATCGATCCCTTCCTGAGGCTACTAAAGGAATTCTCAAGTCGCCAGAATCAGCTTCTTGCAACTCATGCTGCTTGAAGAATTCATCATTCCAAGCGCAGACACATGATACCATACTGTTCTCACAACGCCAAATGCAAGACACTGAAAACATTGCAGCAAAACTTTTAAAGGGGCTGAATAGTATGAAGAGCATCGTCGAAGAGGCAATATCTTTAGAAGGACCATCTTGTTTTCCATCAAAATTCAACGTTGACGAGATCAGGTCAGCTACTAAGCATGCTTCAAAACTTGAGACAACAACAAAGAAGTGGCTAGCAATGATGGCAAAAGACTGCAACCGTTTCTGTAAAATAATGAGATTAGCAGAAAACAAGTTAGCATCTCCTTTAAATGATGACATTCACAAGGGAAGGAAGAAGATAATCTTTGCTGATGAGGTTGGTGGTGTCCTGTGTCAGGTCAAGCACTACGAACAGCAGCCAGTTGCTTTCATCTTTCCAAAAATTTAG

Network for GWHGAAEX014118

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.480
SRP064423	SRR2545915	Juvenile tuber	0.910
SRP108465	SRR5643513	five period of Gastrodia elata	2.530
	SRR5643514	five period of Gastrodia elata	2.630
	SRR5643515	five period of Gastrodia elata	2.330
	SRR5643524	five period of Gastrodia elata	1.890
	SRR5643525	five period of Gastrodia elata	0.610
	SRR5643528	five period of Gastrodia elata	0.230
	SRR5643658	five period of Gastrodia elata	0.490
	SRR5643659	five period of Gastrodia elata	2.390
	SRR5643660	five period of Gastrodia elata	1.400
	SRR5643661	five period of Gastrodia elata	2.130
	SRR5643662	five period of Gastrodia elata	0.850
	SRR5643663	five period of Gastrodia elata	0.900
	SRR5643664	five period of Gastrodia elata	0.430
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.080
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.930
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.320
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.110
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.350
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.850
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.230
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.330
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.920
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	7.380
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.270
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.270
SRP279888	Gastro	Gastrodia elata tuber	0.41
	Juven	Juvenile tuber	0.27
	Mother_Gastro	Mother tuber of Gastrodia elata	0.25
	Mother_Juven	Mother tuber of Juvenile	0.12