Detail information of GWHGAAEX014123/evm.TU.scaffold_56.104


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17211.00E-120FOG: Zn-finger
nrgi|695015037|ref|XP_009394368.1|2.05E-133PREDICTED: zinc finger protein NUTCRACKER-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SCQ6|IDD2_ARATH3.00E-121Protein indeterminate-domain 2 {ECO:0000303|PubMed:16784536}
trEMBLtr|R0HJI7|R0HJI7_9BRAS5.00E-126Uncharacterized protein {ECO:0000313|EMBL:EOA23993.1}
TAIRAT3G507001.00E-120indeterminate(ID)-domain 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006638009603803380+
Transcript Sequence

Network for GWHGAAEX014123

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.620
SRR2545915Juvenile tuber22.120
SRP108465SRR5643513five period of Gastrodia elata13.210
SRR5643514five period of Gastrodia elata6.200
SRR5643515five period of Gastrodia elata7.570
SRR5643524five period of Gastrodia elata6.300
SRR5643525five period of Gastrodia elata5.210
SRR5643528five period of Gastrodia elata4.300
SRR5643658five period of Gastrodia elata5.440
SRR5643659five period of Gastrodia elata3.280
SRR5643660five period of Gastrodia elata2.820
SRR5643661five period of Gastrodia elata5.790
SRR5643662five period of Gastrodia elata4.560
SRR5643663five period of Gastrodia elata2.090
SRR5643664five period of Gastrodia elata3.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.580
SRR6049655Rhizomagastrodiae_C368-T10_good_114.010
SRR6049656Rhizomagastrodiae_C368-T07_good_111.620
SRR6049657Rhizomagastrodiae_C368-T07_good_112.400
SRR6049658Rhizomagastrodiae_C368-T04_good_111.510
SRR6049659Rhizomagastrodiae_C368-T04_good_113.250
SRR6049660Rhizomagastrodiae_C368-T01_good_113.690
SRR6049661Rhizomagastrodiae_C368-T04_good_114.730
SRR6049662Rhizomagastrodiae_C368-T01_good_114.670
SRR6049663Rhizomagastrodiae_C368-T01_good_111.500
SRR6049664Rhizomagastrodiae_C368-T10_good_114.240
SRR6049665Rhizomagastrodiae_C368-T10_good_114.240
SRP279888GastroGastrodia elata tuber 3.11
JuvenJuvenile tuber15.75
Mother_GastroMother tuber of Gastrodia elata 33.05
Mother_JuvenMother tuber of Juvenile 16.72