Detail information of GWHGAAEX014143/evm.TU.scaffold_57.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672138516|ref|XP_008793017.1|1.08E-35PREDICTED: dof zinc finger protein DOF1.5-like [Phoenix dactylifera]
Swissprottr|Q8W1E3|CDF1_ARATH2.00E-31Cyclic dof factor 1
trEMBLtr|M0S6F2|M0S6F2_MUSAM1.00E-34Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P09110_001}
TAIRAT5G624306.00E-31cycling DOF factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000055821466824253+
Transcript Sequence

Network for GWHGAAEX014143

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module10

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof921456.80E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.200
SRR2545915Juvenile tuber14.440
SRP108465SRR5643513five period of Gastrodia elata24.680
SRR5643514five period of Gastrodia elata24.110
SRR5643515five period of Gastrodia elata22.330
SRR5643524five period of Gastrodia elata33.610
SRR5643525five period of Gastrodia elata6.980
SRR5643528five period of Gastrodia elata10.580
SRR5643658five period of Gastrodia elata3.330
SRR5643659five period of Gastrodia elata19.210
SRR5643660five period of Gastrodia elata14.260
SRR5643661five period of Gastrodia elata21.410
SRR5643662five period of Gastrodia elata9.190
SRR5643663five period of Gastrodia elata3.970
SRR5643664five period of Gastrodia elata11.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.780
SRR6049655Rhizomagastrodiae_C368-T10_good_1136.680
SRR6049656Rhizomagastrodiae_C368-T07_good_134.070
SRR6049657Rhizomagastrodiae_C368-T07_good_124.110
SRR6049658Rhizomagastrodiae_C368-T04_good_126.670
SRR6049659Rhizomagastrodiae_C368-T04_good_135.930
SRR6049660Rhizomagastrodiae_C368-T01_good_126.750
SRR6049661Rhizomagastrodiae_C368-T04_good_125.720
SRR6049662Rhizomagastrodiae_C368-T01_good_126.880
SRR6049663Rhizomagastrodiae_C368-T01_good_124.440
SRR6049664Rhizomagastrodiae_C368-T10_good_128.950
SRR6049665Rhizomagastrodiae_C368-T10_good_128.950
SRP279888GastroGastrodia elata tuber 4.73
JuvenJuvenile tuber26.18
Mother_GastroMother tuber of Gastrodia elata 43.56
Mother_JuvenMother tuber of Juvenile 23.80