Detail information of GWHGAAEX014146/evm.TU.scaffold_57.26
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|470153898|ref|YP_006282400.1| | 5.00E-74 | Uroporphyrin-III C-methyltransferase [Pectobacterium sp. SCC3193] |
| KOG | KOG1527 | 1.00E-153 | Uroporphyrin III methyltransferase |
| nr | gi|695037563|ref|XP_009406276.1| | 1.67E-169 | PREDICTED: uroporphyrinogen-III C-methyltransferase [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|O19889|SUMT_CYACA | 3.00E-51 | Uroporphyrinogen-III C-methyltransferase |
| trEMBL | tr|M0TAK9|M0TAK9_MUSAM | 1.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P27140_001} |
| TAIR | AT5G40850 | 1.00E-153 | urophorphyrin methylase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000055 | 1167593 | 1180900 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014146
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00590.19 | TP_methylase | 116 | 326 | 2.30E-47 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0019354 | Biological Process | siroheme biosynthetic process |
| GO:0008168 | Molecular Function | methyltransferase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 26.190 |
| SRR2545915 | Juvenile tuber | 24.270 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 27.270 |
| SRR5643514 | five period of Gastrodia elata | 26.160 | |
| SRR5643515 | five period of Gastrodia elata | 27.180 | |
| SRR5643524 | five period of Gastrodia elata | 28.880 | |
| SRR5643525 | five period of Gastrodia elata | 23.770 | |
| SRR5643528 | five period of Gastrodia elata | 47.660 | |
| SRR5643658 | five period of Gastrodia elata | 29.940 | |
| SRR5643659 | five period of Gastrodia elata | 31.640 | |
| SRR5643660 | five period of Gastrodia elata | 39.430 | |
| SRR5643661 | five period of Gastrodia elata | 40.850 | |
| SRR5643662 | five period of Gastrodia elata | 43.270 | |
| SRR5643663 | five period of Gastrodia elata | 32.590 | |
| SRR5643664 | five period of Gastrodia elata | 33.720 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 36.470 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 33.670 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 35.010 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 33.250 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 40.630 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 40.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 42.240 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 41.900 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 34.170 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 41.300 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.310 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.310 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 37.37 |
| Juven | Juvenile tuber | 47.07 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 40.34 | |
| Mother_Juven | Mother tuber of Juvenile | 39.63 |