Detail information of GWHGAAEX014149/evm.TU.scaffold_57.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83643344|ref|YP_431779.1|6.00E-06RNA-binding protein [Hahella chejuensis KCTC 2396]
KOGKOG46600Protein Mei2, essential for commitment to meiosis, and related proteins
nrgi|743865550|ref|XP_010904858.1|0PREDICTED: protein MEI2-like 2 isoform X1 [Elaeis guineensis]
Swissprottr|Q6ZI17|OML2_ORYSJ0Protein MEI2-like 2
trEMBLtr|A0A061GF77|A0A061GF77_THECC0RNA-binding protein, putative isoform 1 {ECO:0000313|EMBL:EOY27812.1}
TAIRAT1G294000MEI2-like protein 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005514866491502943+
Transcript Sequence

Network for GWHGAAEX014149

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00076.21RRM_11892531.50E-10
PF00076.21RRM_12743392.40E-11
PF04059.11RRM_26877831.00E-53
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms167.210
SRR2545915Juvenile tuber93.090
SRP108465SRR5643513five period of Gastrodia elata113.310
SRR5643514five period of Gastrodia elata105.760
SRR5643515five period of Gastrodia elata102.230
SRR5643524five period of Gastrodia elata110.650
SRR5643525five period of Gastrodia elata190.300
SRR5643528five period of Gastrodia elata146.090
SRR5643658five period of Gastrodia elata204.390
SRR5643659five period of Gastrodia elata51.920
SRR5643660five period of Gastrodia elata63.200
SRR5643661five period of Gastrodia elata48.450
SRR5643662five period of Gastrodia elata72.620
SRR5643663five period of Gastrodia elata66.880
SRR5643664five period of Gastrodia elata89.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1109.370
SRR6049655Rhizomagastrodiae_C368-T10_good_1119.650
SRR6049656Rhizomagastrodiae_C368-T07_good_193.370
SRR6049657Rhizomagastrodiae_C368-T07_good_1129.800
SRR6049658Rhizomagastrodiae_C368-T04_good_1150.000
SRR6049659Rhizomagastrodiae_C368-T04_good_1195.070
SRR6049660Rhizomagastrodiae_C368-T01_good_1125.070
SRR6049661Rhizomagastrodiae_C368-T04_good_1129.110
SRR6049662Rhizomagastrodiae_C368-T01_good_163.120
SRR6049663Rhizomagastrodiae_C368-T01_good_186.520
SRR6049664Rhizomagastrodiae_C368-T10_good_182.900
SRR6049665Rhizomagastrodiae_C368-T10_good_182.900
SRP279888GastroGastrodia elata tuber 86.07
JuvenJuvenile tuber87.36
Mother_GastroMother tuber of Gastrodia elata 123.21
Mother_JuvenMother tuber of Juvenile 106.22