Detail information of GWHGAAEX014150/evm.TU.scaffold_57.31


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743794931|ref|XP_010924311.1|1.40E-71PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Elaeis guineensis]
Swissprottr|O65399|E131_ARATH1.00E-23Glucan endo-1,3-beta-glucosidase 1 (Precursor)
trEMBLtr|M0SM07|M0SM07_MUSAM2.00E-59Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P07900_001}
TAIRAT1G293801.00E-31Carbohydrate-binding X8 domain superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005515050381507326+
Transcript Sequence

Network for GWHGAAEX014150

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07983.12X81372075.00E-20
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyCBM43

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.210
SRR2545915Juvenile tuber2.550
SRP108465SRR5643513five period of Gastrodia elata1.820
SRR5643514five period of Gastrodia elata0.870
SRR5643515five period of Gastrodia elata1.310
SRR5643524five period of Gastrodia elata1.050
SRR5643525five period of Gastrodia elata0.900
SRR5643528five period of Gastrodia elata1.320
SRR5643658five period of Gastrodia elata0.430
SRR5643659five period of Gastrodia elata0.230
SRR5643660five period of Gastrodia elata0.370
SRR5643661five period of Gastrodia elata0.470
SRR5643662five period of Gastrodia elata0.580
SRR5643663five period of Gastrodia elata0.410
SRR5643664five period of Gastrodia elata0.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.080
SRR6049655Rhizomagastrodiae_C368-T10_good_11.560
SRR6049656Rhizomagastrodiae_C368-T07_good_10.860
SRR6049657Rhizomagastrodiae_C368-T07_good_12.960
SRR6049658Rhizomagastrodiae_C368-T04_good_12.300
SRR6049659Rhizomagastrodiae_C368-T04_good_12.850
SRR6049660Rhizomagastrodiae_C368-T01_good_10.780
SRR6049661Rhizomagastrodiae_C368-T04_good_12.090
SRR6049662Rhizomagastrodiae_C368-T01_good_11.500
SRR6049663Rhizomagastrodiae_C368-T01_good_10.520
SRR6049664Rhizomagastrodiae_C368-T10_good_10.700
SRR6049665Rhizomagastrodiae_C368-T10_good_10.700
SRP279888GastroGastrodia elata tuber 1.76
JuvenJuvenile tuber0.95
Mother_GastroMother tuber of Gastrodia elata 26.57
Mother_JuvenMother tuber of Juvenile 20.16