Detail information of GWHGAAEX014151/evm.TU.scaffold_57.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743758377|ref|XP_010926447.1|1.71E-63PREDICTED: cold-regulated 413 inner membrane protein 1, chloroplastic-like [Elaeis guineensis]
Swissprottr|Q94AL8|CRIM1_ARATH6.00E-49Cold-regulated 413 inner membrane protein 1, chloroplastic (Precursor)
trEMBLtr|D7TJZ4|D7TJZ4_VITVI1.00E-57Putative uncharacterized protein {ECO:0000313|EMBL:CBI30816.3}
TAIRAT1G293909.00E-46cold regulated 314 thylakoid membrane 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005515108381519430-
Transcript Sequence

Network for GWHGAAEX014151

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05562.10WCOR4131072572.70E-40
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.640
SRR2545915Juvenile tuber21.180
SRP108465SRR5643513five period of Gastrodia elata9.630
SRR5643514five period of Gastrodia elata9.770
SRR5643515five period of Gastrodia elata10.650
SRR5643524five period of Gastrodia elata9.210
SRR5643525five period of Gastrodia elata3.160
SRR5643528five period of Gastrodia elata2.680
SRR5643658five period of Gastrodia elata4.780
SRR5643659five period of Gastrodia elata10.670
SRR5643660five period of Gastrodia elata8.580
SRR5643661five period of Gastrodia elata12.730
SRR5643662five period of Gastrodia elata11.650
SRR5643663five period of Gastrodia elata14.590
SRR5643664five period of Gastrodia elata12.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.610
SRR6049655Rhizomagastrodiae_C368-T10_good_13.930
SRR6049656Rhizomagastrodiae_C368-T07_good_111.390
SRR6049657Rhizomagastrodiae_C368-T07_good_18.930
SRR6049658Rhizomagastrodiae_C368-T04_good_110.290
SRR6049659Rhizomagastrodiae_C368-T04_good_16.620
SRR6049660Rhizomagastrodiae_C368-T01_good_18.260
SRR6049661Rhizomagastrodiae_C368-T04_good_18.890
SRR6049662Rhizomagastrodiae_C368-T01_good_113.520
SRR6049663Rhizomagastrodiae_C368-T01_good_113.400
SRR6049664Rhizomagastrodiae_C368-T10_good_110.540
SRR6049665Rhizomagastrodiae_C368-T10_good_110.540
SRP279888GastroGastrodia elata tuber 13.01
JuvenJuvenile tuber6.95
Mother_GastroMother tuber of Gastrodia elata 2.24
Mother_JuvenMother tuber of Juvenile 3.89