Gene detail

Detail information of GWHGAAEX014153/evm.TU.scaffold_57.35

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743758333\|ref\|XP_010926244.1\|	0	PREDICTED: uncharacterized protein LOC105048593 [Elaeis guineensis]
trEMBL	tr\|M0TKN7\|M0TKN7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P25510_001}
TAIR	AT1G29370	1.00E-88	Kinase-related protein of unknown function (DUF1296)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000055	1700263	1721938	-

Transcript Sequence
>GWHTAAEX014153 CGGGAAGTCGTATTTATAGCATCTATAGCTTTCTACTGAACCAAGAAGGGTTTCGTCGCTCCCGTGGTTCTGCGTCTACTTCTCTAAGAAACGAGGGTGTCTGGAGACGAGCGCAAGAAGGGGAGGCGATAAGAAGGGGTAGGGGAGGAGGAGGGGGAAGAAGATGAATAGCGGCGGCGTTAGCACTGGAGGGGGCAACAAGGGTAACGGTAGCGTTGCGGCAGCTGGAATCCCTGTTGGGGTGAGAAAGATGGTGCAAAGTTTGAAGGAGATCGTGAATCTCCCAGACCAAGAGATCTATGCCACGCTTAGGGAGTGCGGCATGGATCCCAGCGAGACCGTGCAACGACTTCTACGTCAAGATTCATTTCATGAAGTGAAGAGCAAACGTGAGAGGAAGAAGGAGACGAAAGAACCCCGTGATTCTAAATCTCGGACTACAAACAATGCTTCTGGGCGTGATAGCCGGGGCATCTCTGATCGTATGCCACGAACTAGTCCCATAGTGAGCAGTTCAAATGATTATGGAGGCGGTTATGGTAAGGCTGTTCAAAAGAAAGATGAGGGGGCAGGAAGTATTCCGTCTTTTTCAAACGTGGGATTTCGCTCTTCTGTTAGTAGAAAATCAGCAGTCATAAGTGAAAATTCTTCTTCAGAGAACTTATGGCAGGCAACTGGTTCTTTTAATGGGGGTTCTCTGCACCCTCAACCATCAGGGCATCCACATACATGGGCTGGGTTGCCTGGCCATTTTTCCATGGCTGATATTGTGAAAATGGGTAGGCCTCAAGCCAAGGCACCTGTATCTTCCACTCTTACAGGAAATTCGCTACATTCCTCTCACAATCAAATCACATCAGATGCAAGTGAAAAGTATTCACCGAATCCTGTTTGGCCATCAGATCATGATCAGAGAGTTCATTCTTCTCAAATTCCTCATCAGCCTACTGAAGACATAAATATTGAACCAGGAACAACTAGAAATGAGTATGCTTCTGACGATGGTTGGCCCTCTGTTAGCCAGTCCAATCCTGCAACTGCTCCAGTCATTCTTGAAATTTCAAGAGCTGCTGCCTCTTATCCTGATGCTTCCAAGGTTGATTTGATTGTTGATGAAGTATCTTTGCATCATACGTTAAATGAAGATGAAATTGCTGAATTTGATCAAAGTTCTAACTCTGAAAGCTCTATAGAATCTCAATCTCTATCTGAGAGAAAGATTCAGGAGAACACATCTGAAAATGAATCCCAGTCAGATGATGTTTCACAACAAAACGCAAGTGGCTATTCATCACAAAGGCATATATTTGAGCAACCAGTTGATGATGCCAATGTAGAAATTTCATCAGCTGCTGCCAATTTGCAGAGTGTTAGACTGCAAAAAGATGGTCTAACTGCACCATCTTTGGAGGATAACCCTGCTGTAATAATTCCTAGACATCTGCAAGTTACTAATGCTGACTGCTCACATCTGAGCTTTGGTAGTTTTGGCTCTGGATTAGGCACTTCTTTTACTGGATCATTACAGCAAAAGCCAATGCAGGACAATTCAGAGGTTACTAAGGTTGCTGATGACGTTCCTTCACTTGATCATTCAGAATCCAGGAACTCCAATTATTATGATAATGATGAGTTAAAATCTCAAATAAATGAAGATGTGGTTTCTAGAGGTGGCATTAATGCTATTAATTATGACATATCTTCAGTTTCAGAACCTGAGCTCATCAGGGATGATTCAGTGAATAGTACACATGAATTGCAGTATAATTTTCCTTCCTTATCTGGCTATGGGGCTTCAACATCGGCGCAACACAATAGTGTTTCATTTTCTCACCCACAAACTAATTTGCAAATGCAAAATCTTACCACTTTGTCAACTCTAATGCAGCCATATACCAGTTCCTTACCAGGCAGTTTATTGGCACCCACTCTTCAACCGACACATCAACCTCTCAGAGATATTGATCTCCCGTTTTCATCGTTGCTTTCAAACCAATCTCTGTCTACAAAACACGGTGCAACAACCTCTATCAGTGGGCCAACCATTTCTATTAATGAGCCGAAGCCAAGTGTTTTCTCCAATCTTCAGCAAGTTCCTCAAAGCTCCACCAGCCCGAGTCTCCCCACTGGTCATCCAATCCCTCAGCATCTTCACATCAATCCTTATTCTCAGGCCTCCCTACCTTTAGGCCCATTTGCTAATGTGATTAGCTATCCATTCCTTCCCCAGAGCTACACTTACCTTCCATCAGCTGCATTCCCTCAAGCATACACCAGTAATGGCACACCGTTCCATCAGTCTGCATCAGCAGTTCACAATACTGGCTTAAAATATACACTTCCACAGTATAAAAGCAGCTTACCAGTTGCCAGCTTACCGCAGCCTGCCACAGCAGTCTCTCCATATGGAAGTTACAATGGTTCTGCTAATGTTCCTGGTAATTTTATCTTGAATCCCTCAACTACGTCTACAAGCACAACCATAGGATTCGATGAAGTTTTAAATGCTCAGAAAGAGGTGGCGCATTACCTCCACTTTCAACAGAACGATAGCTCGCCCATGTGGGTCCATAACGGTGGTTCTAGAACTGTGGCGCCTCTTCCTCCCAACACGTTCTACGGATTTCAAGGGCAGAATCATCAGCTCAATAGCTTCAGGCAAACTCAGCAGCCCACACATTACGGGCCGATGGGGTACCTGAACATGTATCAGAATCATCAGATTGGGGGCGGGCAGCCTCCAGAGCATCAGCAGAATCCTGGCGAGGCAAGCTTGAACGGATCTCAAGGCAATCCCTCTCAGACTCACCAGATCTGGCAGCATGGATATTGATGCGGGTAGTGGGCTCAGAAATCTCCATATAGATGCTTTGGTGTTACACGGTTCGATCGAGTGAAGGCTCAGCTTGAGTTTCTGACTGATCAACTGTATATAAACTGAGTATCTTGCAGGCTGCTATTCTATGCCTGAGTTTGTAGCGTGGTGGGTGTGTGCGTGTGTGGGAGTTAATTTAGCAGTGTTTTTCTTTGGTTGTTTTTGACTGAAACTTTGTGCACTTTTTGTTCTGTTAATTTTAGCTTAAGTTGATCACTTAACAAGTTTTTGATTTTTTATGCTATAATAGGTTTATGCTACAATTTCAGTTCATATGTTTTAGCCTGCATAAAATTGCAAAAATGGTCAAGTACTATTTGCATAATTTTTCAAATAATATACGCATCAGCTAGTATATTTTAATATGTATGCTTATGTATGTATGTTTGCATTGTGTAACGGAAGCTTGTATGTATA

Network for GWHGAAEX014153

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06972.10	DUF1296	23	81	1.00E-29

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	137.330
SRP064423	SRR2545915	Juvenile tuber	160.590
SRP108465	SRR5643513	five period of Gastrodia elata	89.320
	SRR5643514	five period of Gastrodia elata	62.540
	SRR5643515	five period of Gastrodia elata	70.820
	SRR5643524	five period of Gastrodia elata	66.350
	SRR5643525	five period of Gastrodia elata	58.350
	SRR5643528	five period of Gastrodia elata	49.600
	SRR5643658	five period of Gastrodia elata	54.050
	SRR5643659	five period of Gastrodia elata	82.740
	SRR5643660	five period of Gastrodia elata	106.080
	SRR5643661	five period of Gastrodia elata	84.970
	SRR5643662	five period of Gastrodia elata	77.150
	SRR5643663	five period of Gastrodia elata	81.870
	SRR5643664	five period of Gastrodia elata	85.010
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	106.430
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	104.720
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	81.390
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	135.260
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	127.820
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	158.490
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	118.540
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	124.480
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	75.160
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	99.630
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	71.520
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	71.520
SRP279888	Gastro	Gastrodia elata tuber	114.44
	Juven	Juvenile tuber	223.51
	Mother_Gastro	Mother tuber of Gastrodia elata	86.39
	Mother_Juven	Mother tuber of Juvenile	173.01