Detail information of GWHGAAEX014156/evm.TU.scaffold_57.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG07241.00E-26Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
nrgi|695007293|ref|XP_009390189.1|3.65E-32PREDICTED: protein RADIALIS-like 3 [Musa acuminata subsp. malaccensis]
Swissprottr|Q1A173|RADL6_ARATH4.00E-27Protein RADIALIS-like 6
trEMBLtr|M0SAD4|M0SAD4_MUSAM1.00E-32Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P22930_001}
TAIRAT1G752501.00E-26RAD-like 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005519364731937015-
Transcript Sequence

Network for GWHGAAEX014156

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.540
SRR2545915Juvenile tuber1.960
SRP108465SRR5643513five period of Gastrodia elata5.900
SRR5643514five period of Gastrodia elata12.250
SRR5643515five period of Gastrodia elata10.760
SRR5643524five period of Gastrodia elata8.170
SRR5643525five period of Gastrodia elata113.290
SRR5643528five period of Gastrodia elata27.800
SRR5643658five period of Gastrodia elata16.120
SRR5643659five period of Gastrodia elata8.460
SRR5643660five period of Gastrodia elata7.580
SRR5643661five period of Gastrodia elata9.040
SRR5643662five period of Gastrodia elata5.920
SRR5643663five period of Gastrodia elata9.500
SRR5643664five period of Gastrodia elata3.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.510
SRR6049655Rhizomagastrodiae_C368-T10_good_111.900
SRR6049656Rhizomagastrodiae_C368-T07_good_16.860
SRR6049657Rhizomagastrodiae_C368-T07_good_15.340
SRR6049658Rhizomagastrodiae_C368-T04_good_11.870
SRR6049659Rhizomagastrodiae_C368-T04_good_12.680
SRR6049660Rhizomagastrodiae_C368-T01_good_17.490
SRR6049661Rhizomagastrodiae_C368-T04_good_13.360
SRR6049662Rhizomagastrodiae_C368-T01_good_15.400
SRR6049663Rhizomagastrodiae_C368-T01_good_110.780
SRR6049664Rhizomagastrodiae_C368-T10_good_16.160
SRR6049665Rhizomagastrodiae_C368-T10_good_16.160
SRP279888GastroGastrodia elata tuber 3.62
JuvenJuvenile tuber50.35
Mother_GastroMother tuber of Gastrodia elata 1.34
Mother_JuvenMother tuber of Juvenile 4.20