Detail information of GWHGAAEX014157/evm.TU.scaffold_57.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34377.00E-66Anaphase-promoting complex (APC), subunit 10
nrgi|743794855|ref|XP_010924286.1|2.90E-124PREDICTED: anaphase-promoting complex subunit 10 [Elaeis guineensis]
Swissprottr|Q9ZPW2|APC10_ARATH4.00E-109Anaphase-promoting complex subunit 10
trEMBLtr|B3TLV0|B3TLV0_ELAGV3.00E-125Anaphase-promoting complex subunit 10 {ECO:0000256|PIRNR:PIRNR028841}
TAIRHS76570357.00E-66Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005519411491961242-
Transcript Sequence

Network for GWHGAAEX014157

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03256.15ANAPC10241898.50E-76
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03357APC10, DOC1 Ubiquitin mediated proteolysis map04120
Cell cyclemap04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Progesterone-mediated oocyte maturationmap04914

Gene Ontology

GO term OntologyName
GO:0031145Biological Processanaphase-promoting complex-dependent catabolic process
GO:0005680Cellular Componentanaphase-promoting complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.520
SRR2545915Juvenile tuber67.240
SRP108465SRR5643513five period of Gastrodia elata56.080
SRR5643514five period of Gastrodia elata68.430
SRR5643515five period of Gastrodia elata54.790
SRR5643524five period of Gastrodia elata68.740
SRR5643525five period of Gastrodia elata85.710
SRR5643528five period of Gastrodia elata88.610
SRR5643658five period of Gastrodia elata82.750
SRR5643659five period of Gastrodia elata50.250
SRR5643660five period of Gastrodia elata45.240
SRR5643661five period of Gastrodia elata51.880
SRR5643662five period of Gastrodia elata45.600
SRR5643663five period of Gastrodia elata51.310
SRR5643664five period of Gastrodia elata42.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.060
SRR6049655Rhizomagastrodiae_C368-T10_good_168.970
SRR6049656Rhizomagastrodiae_C368-T07_good_140.430
SRR6049657Rhizomagastrodiae_C368-T07_good_132.260
SRR6049658Rhizomagastrodiae_C368-T04_good_131.580
SRR6049659Rhizomagastrodiae_C368-T04_good_131.800
SRR6049660Rhizomagastrodiae_C368-T01_good_133.040
SRR6049661Rhizomagastrodiae_C368-T04_good_127.000
SRR6049662Rhizomagastrodiae_C368-T01_good_139.100
SRR6049663Rhizomagastrodiae_C368-T01_good_137.020
SRR6049664Rhizomagastrodiae_C368-T10_good_151.740
SRR6049665Rhizomagastrodiae_C368-T10_good_151.740
SRP279888GastroGastrodia elata tuber 53.01
JuvenJuvenile tuber55.22
Mother_GastroMother tuber of Gastrodia elata 53.00
Mother_JuvenMother tuber of Juvenile 46.47