Detail information of GWHGAAEX014159/evm.TU.scaffold_57.43


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00486.00E-72Transcription factor, Myb superfamily
nrgi|332268657|gb|AEE37094.1|1.08E-76MYB transcription factor [Crocus sativus]
Swissprottr|Q9SPG9|MYB24_ARATH2.00E-72Transcription factor MYB24
trEMBLtr|D6MK84|D6MK84_9ASPA3.00E-78Transcription factor {ECO:0000313|EMBL:ADG57931.1} (Fragment)
TAIRAT5G403506.00E-72myb domain protein 24

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005520443022046527-
Transcript Sequence

Network for GWHGAAEX014159

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding11584.80E-16
PF00249.30Myb_DNA-binding641071.80E-14
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.560
SRR2545915Juvenile tuber0.950
SRP108465SRR5643513five period of Gastrodia elata0.220
SRR5643514five period of Gastrodia elata0.440
SRR5643515five period of Gastrodia elata1.650
SRR5643524five period of Gastrodia elata1.040
SRR5643525five period of Gastrodia elata1.080
SRR5643528five period of Gastrodia elata2.530
SRR5643658five period of Gastrodia elata1.120
SRR5643659five period of Gastrodia elata0.300
SRR5643660five period of Gastrodia elata0.200
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.990
SRR5643663five period of Gastrodia elata0.100
SRR5643664five period of Gastrodia elata0.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.520
SRR6049655Rhizomagastrodiae_C368-T10_good_10.740
SRR6049656Rhizomagastrodiae_C368-T07_good_11.440
SRR6049657Rhizomagastrodiae_C368-T07_good_10.640
SRR6049658Rhizomagastrodiae_C368-T04_good_12.130
SRR6049659Rhizomagastrodiae_C368-T04_good_13.400
SRR6049660Rhizomagastrodiae_C368-T01_good_14.040
SRR6049661Rhizomagastrodiae_C368-T04_good_12.220
SRR6049662Rhizomagastrodiae_C368-T01_good_11.660
SRR6049663Rhizomagastrodiae_C368-T01_good_12.980
SRR6049664Rhizomagastrodiae_C368-T10_good_10.380
SRR6049665Rhizomagastrodiae_C368-T10_good_10.380
SRP279888GastroGastrodia elata tuber 1.21
JuvenJuvenile tuber0.78
Mother_GastroMother tuber of Gastrodia elata 2.49
Mother_JuvenMother tuber of Juvenile 1.55