Gene detail

Detail information of GWHGAAEX014164/evm.TU.scaffold_57.51

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|392404032\|ref\|YP_006440644.1\|	1.00E-20	alpha/beta hydrolase fold containing protein [Turneriella parva DSM 21527]
nr	gi\|743874054\|ref\|XP_010906979.1\|	0	PREDICTED: uncharacterized protein LOC105033767 isoform X1 [Elaeis guineensis]
trEMBL	tr\|M0U2A8\|M0U2A8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P21490_001}
TAIR	AT1G15060	0	Uncharacterised conserved protein UCP031088, alpha/beta hydrolase

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000055	2255329	2313452	-

Transcript Sequence
>GWHTAAEX014164 TCGCCCTTCCCCCTCGGCGCCACGTGTCTTCCTCTACTAAGAGTCTCCGTCGCCCCACCTCCTCGCAACCTCCGCCGAAGGCTATAAGCCTCACCTCACATCTCTATTCGGCGAAACCCCTCTTCGTGGAAGGAGTATCTCTTTTTCCTCCTCTCGGTCGAGCGGCGCAAATGAGTTGTGCGACTCTCCTCCTCCACCGTCCATAGAGAGTGCCATTCTCTCGACATCTCCCTCCATTTCAGCAAAGCGGCCGAGCACTTCGTCCCTCCGCCGCGTGTCGCCGACCTTCCCCTTCGACGCCGTCAAGCAATTTAGAGCTCAACGGAAAGATTTGAAACGGAACCGACACAAAGGCCCTCTGAGAATGCCTCACGCTCACGCCGCCGATCTCCGAGCAGCCCTACAGGCCGCGGCAATTTGCCTTTGCCCTTCTCATCGTCGTCAGCGAACCCAGGCGCGTTTCTTGGCAGTACGCTCATCAGTTTCTTTATCGCAGTCGTTCTCTGCCTCTTGCAGGGCCTCTGCCGGAAGCCCAATTACTTCGATCGATGAGTGGAAGAAGCCGGAAATCTGTACTGCTGATGAACTCCACTACGTGTCAGTGCCTGGCACTGACTGGAAGATCGCCCTCTGGCGATATCTTCCATCCACCGATGCGCCTATTAGGAATCACCCATTGATGCTATTGTCTGGTCTTGGGACAAACGCAATTGGATTTGATCTTTCTCCCGGAGCTTCATTTGCTCGCCACATGTCAAAACATGGGTTTGATACATGGATTGTTGAAGTCAGAGGCGCTGGTTTGAGCATGCGTAGTCGTGAATTCAAAGAATCTGTTCAATCATCTGATGAGCCTGCCAGATCAAATTTAGATTCAGCTGATAGAGTAAACTTGACTGTTTATTCATCTGTTGACAAACTTTCTGCTGTGAGCATCAACACAGAATTTGGTTCGAAAGTGTCCAATGTGAATGGAAATGAGGTTGACTCAATGTTAGTTGCTAAACTAACTTCTGCTCTTATGCATTTGGCTGAAAGATTTTCAGGTTTGTTAAATGATGGTCAATTGAGGGTTATCTCGGTAAAGTTTCTTGAACAGATCTCGAAACTCTTGGAAGATGCTGGATTAGCTGAACGTTTTAATGAGATTGCAGTTAAAATTTCAAATTTGCTTGAGGCAAGGCAGAATTCTGCCGTTGCCAGCCAGCTCAGAGAACTGAGCCGGCGTCTTATACATATAATTGAAGAAGGCCAAAAGTCAGTTTCTCCACAGCTTTTTGATTTGCAAGAGCGCCTTTCATCCAGTATTGAAGACCTTCAGAAGCAGCTTGATCTCATTGTTAAATATGATTGGGATTTTGATAATTACTTGAAGGAGGATTTGCCTTCTGCGATGGAATACATAAGGAAGCATTGCAAGGTAAAAGATGGCAAATTGCTGACAATTGGTCATTCTATGGGTGGAATTTTGCTATATGCTCTGTTATCAAAGTGCGCTTCCCAAGGAAGTCAATGTGGACTGGCGGCCATCGTTACTTTAGCAGCCTCGATTGACTACACCACTTCAAAATCCTCACTGAAATTGCTGCTGCCTTTAGCTGACCCAGCTCAGGCTCTCAATGTTCCAGTCGTCCCTTTAGGAGCTCTGATGACTGCTGCCTATCCTCTATCATCTCGTCCACCATATGTTTTGTCTTGGATTAATGATCATGTTTCTGCACAGGATATGATGGTTCCAGAGCTTTACGAAAAGCTTGTCTTAAACAACTTCTGCACCATTCCGGCGAAGTTGATACTGCAGCTAACAACGGCGTTCCGGGAAGGAGGGCTGCGAAACAGAGCAGGCACATTCTGCTACAAGGATCACCTTCACAAATGTGACGTCCCGGTCCTCGCCCTCGCCGGAGACCAAGACCTGATCTGCCCTCCCGAAGCAGTCTACGAGACGGTCAAGCTCATTCCTAGGCAGACCATCACTTACCGCGTCTTCGGAAATCCCAGTGGCCCGCACTACGCCCATTATGATCTCGTCGGAGGCCGACTGGCAGAGAGTGAAGTGTACCCATGCATAGTGGAGTTCCTTTGCTGTCATGATGAGTTGAACTGAGCTGAAGCAAAGGATGCAATGTCTATTCTCTTATCATCCATTGATTTCCGCGCCTGCGCCCGGATTTATATTTATTCGTTGTTGCTATTACTGTTTGTAAAAAGGCAGCTTGTGCCCAACTCATATCAATAATAAACATAATAACAATAGTTTCTGTGGTTCTCCCCATTCTGCTGTGTGTTTCTTCATGCCTATGTCTCAGATCATGTTTTAGAACACAAGGGAGCTCATGTTTATTATTGTAAATTGTTGAGAAACTCAATCCCCAGATTATCTAAAGGAAACTTTTGTGTAAATATATTCAGGGTAGTAAGATTGCATGGGCTTAATCCCCTT

Network for GWHGAAEX014164

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12146.7	Hydrolase_4	335	542	6.40E-07

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	17.440
SRP064423	SRR2545915	Juvenile tuber	12.650
SRP108465	SRR5643513	five period of Gastrodia elata	12.610
	SRR5643514	five period of Gastrodia elata	17.040
	SRR5643515	five period of Gastrodia elata	15.170
	SRR5643524	five period of Gastrodia elata	18.480
	SRR5643525	five period of Gastrodia elata	18.860
	SRR5643528	five period of Gastrodia elata	30.070
	SRR5643658	five period of Gastrodia elata	25.380
	SRR5643659	five period of Gastrodia elata	10.310
	SRR5643660	five period of Gastrodia elata	13.560
	SRR5643661	five period of Gastrodia elata	12.220
	SRR5643662	five period of Gastrodia elata	11.060
	SRR5643663	five period of Gastrodia elata	11.720
	SRR5643664	five period of Gastrodia elata	11.230
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.570
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	25.730
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.130
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	18.910
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	20.750
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	16.760
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	18.150
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.380
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.370
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.200
SRP279888	Gastro	Gastrodia elata tuber	17.26
	Juven	Juvenile tuber	16.18
	Mother_Gastro	Mother tuber of Gastrodia elata	48.70
	Mother_Juven	Mother tuber of Juvenile	29.41