Detail information of GWHGAAEX014172/evm.TU.scaffold_57.68
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 3.00E-30 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG0192 | 0 | Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs |
| nr | gi|703157583|ref|XP_010111765.1| | 0 | Serine/threonine-protein kinase HT1 [Morus notabilis] |
| Swissprot | tr|Q2MHE4|HT1_ARATH | 8.00E-65 | Serine/threonine-protein kinase HT1 |
| trEMBL | tr|W9SJ94|W9SJ94_9ROSA | 0 | Serine/threonine-protein kinase HT1 {ECO:0000313|EMBL:EXC31627.1} |
| TAIR | AT3G01490 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000055 | 2958809 | 2984120 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX014172
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 66 | 335 | 1.40E-61 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | TKL-Pl-4 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.240 |
| SRR2545915 | Juvenile tuber | 10.240 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 21.490 |
| SRR5643514 | five period of Gastrodia elata | 23.730 | |
| SRR5643515 | five period of Gastrodia elata | 18.310 | |
| SRR5643524 | five period of Gastrodia elata | 22.490 | |
| SRR5643525 | five period of Gastrodia elata | 2.740 | |
| SRR5643528 | five period of Gastrodia elata | 4.150 | |
| SRR5643658 | five period of Gastrodia elata | 2.780 | |
| SRR5643659 | five period of Gastrodia elata | 10.310 | |
| SRR5643660 | five period of Gastrodia elata | 8.280 | |
| SRR5643661 | five period of Gastrodia elata | 10.160 | |
| SRR5643662 | five period of Gastrodia elata | 5.700 | |
| SRR5643663 | five period of Gastrodia elata | 7.420 | |
| SRR5643664 | five period of Gastrodia elata | 4.410 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 25.610 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 29.830 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 32.860 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 15.520 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.650 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.350 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 17.840 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 18.810 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 44.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 38.460 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 51.530 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 51.530 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.88 |
| Juven | Juvenile tuber | 16.72 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.11 | |
| Mother_Juven | Mother tuber of Juvenile | 8.28 |