Detail information of GWHGAAEX014174/evm.TU.scaffold_57.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|310822240|ref|YP_003954598.1|9.00E-10transcription factor jumonji [Stigmatella aurantiaca DW4/3-1]
KOGKOG21315.00E-131Uncharacterized conserved protein, contains JmjC domain
nrgi|743757668|ref|XP_010923063.1|5.63E-180PREDICTED: jmjC domain-containing protein 4 isoform X1 [Elaeis guineensis]
Swissprottr|Q9M9E8|FB92_ARATH7.00E-14F-box protein At1g78280
trEMBLtr|M0U2I2|M0U2I2_MUSAM2.00E-176Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P22230_001}
TAIRAT5G630805.00E-1312-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005530361673102741+
Transcript Sequence

Network for GWHGAAEX014174

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02373.21JmjC1252301.40E-18
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyJumonji

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.470
SRR2545915Juvenile tuber14.530
SRP108465SRR5643513five period of Gastrodia elata7.160
SRR5643514five period of Gastrodia elata12.610
SRR5643515five period of Gastrodia elata8.300
SRR5643524five period of Gastrodia elata10.220
SRR5643525five period of Gastrodia elata4.670
SRR5643528five period of Gastrodia elata4.800
SRR5643658five period of Gastrodia elata6.640
SRR5643659five period of Gastrodia elata24.300
SRR5643660five period of Gastrodia elata5.000
SRR5643661five period of Gastrodia elata6.010
SRR5643662five period of Gastrodia elata22.800
SRR5643663five period of Gastrodia elata24.170
SRR5643664five period of Gastrodia elata20.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.430
SRR6049655Rhizomagastrodiae_C368-T10_good_17.750
SRR6049656Rhizomagastrodiae_C368-T07_good_110.150
SRR6049657Rhizomagastrodiae_C368-T07_good_19.270
SRR6049658Rhizomagastrodiae_C368-T04_good_19.460
SRR6049659Rhizomagastrodiae_C368-T04_good_19.500
SRR6049660Rhizomagastrodiae_C368-T01_good_114.880
SRR6049661Rhizomagastrodiae_C368-T04_good_17.040
SRR6049662Rhizomagastrodiae_C368-T01_good_112.140
SRR6049663Rhizomagastrodiae_C368-T01_good_19.560
SRR6049664Rhizomagastrodiae_C368-T10_good_117.170
SRR6049665Rhizomagastrodiae_C368-T10_good_117.170
SRP279888GastroGastrodia elata tuber 8.89
JuvenJuvenile tuber6.56
Mother_GastroMother tuber of Gastrodia elata 6.51
Mother_JuvenMother tuber of Juvenile 5.54