Gene detail

Detail information of GWHGAAEX014176/evm.TU.scaffold_57.73

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1829	Uncharacterized conserved protein, contains C1, PH and RUN domains
nr	gi\|743757688\|ref\|XP_010923164.1\|	PREDICTED: uncharacterized protein LOC105046304 [Elaeis guineensis]
trEMBL	tr\|A0A067K7R9\|A0A067K7R9_JATCU	Uncharacterized protein {ECO:0000313\|EMBL:KDP31078.1}
TAIR	AT3G48200	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000055	3130418	3138212	+

Transcript Sequence
>GWHTAAEX014176 CCACACCCTCCTCCCTTTTGAACTGTCCTCTTCCAATGGCCAGTCCATAGAGCGGCAGCTGACTGAACTAAAGGAGGTCCTAAAATAAAAAGTTGAGACCTTAAGGATGGGGTTTAGAAGCAGAGGACAATGGCTGCCTCTACTTCTTCTTATCCGTTTGTTTACCATTGTCGCGGCCTCCGAAGCTCTTGCCGGTTCTCAGTTTAGCCTTAGATTTGCGAAGACTCCTCAGCCATTCTCCCCATTTGACTCCGCCGCATTTGAGTTTCAGATTTTGGATCTAATCAGCGGGCTTCTCTGCAGAGATTGTGCAGTCAGCTGTAAGCTGGACAGCCACTCCTTCGCAGATTGCAATTCTAGACAAGTGACTTACAGTAGCTTGAATGATGGAGGCCACTTGTTTGAGGCTTGTTTCAGCCGATTCCATGAGCTTCGCTGCTATAGTTATAATTGGACAATCGATACTATTCCACCAACAGCATATGTTTCAGTTCGAACTCCTTTTACAAATGGGTCTGATGTGCCCGTACACATAGTATTCAGTGAACCTTGCAATGGAGGAGGAGGATTTAGGTGTTCTCCTGACCATTGCAGCCTTCTTGTTTATGGAGCTGGGAATGTTCTTTCTGATTCTCTCAAAGTCATCCAGCCAGGCCTTGAGTTCTCTGTCAACGTGAGCATTTCCGTCGGCATTCAGTATGGCCGGTTGGTGCTGGTAATGGATAAGAATTTCTGCACTGATGCAGCCGGCAACAGGTTCACAAGAACATTAAATTCGAGCTTCTTATTACATTTTGATAGAAGGCCCGTTTTTATGAATATAAGGACTCGCATCTCAGAAAAGCTACTTAAGCTTGATGGAAATATGAGGAGAGTTAAAGCAACTAATAATCAAAGGGATCTTATAATCTATTTACATTTTTCAGAGCCTGTCCTTAATTCATCAGCGCAAGTCTTAAATGCTCTTCATGCAAGCAGTGTTGTTCTGGCACCTGTAAATGGGAGCACCCTTGGGAACCGTCGATTGAGATATAAAATTACTGGAGTATCGAGCACAAATGTTGTCACCATAAATTGTGCGTTGAACTCCATACTCAGCAGACAAGGAACTCCTGTTTCTGTTTCTGATCCATTCACCTTTCTATATGATGTTCAAAGGCCCACCGTTAGGCTGAGCACAATTGCGGACTTGAGAACAAGAGAACGCAATATTCCTGTTTTTATTAAGTTTGTGAAACCCGTTTTTGAGTTCAATTCATCTTCGGTACTGGTTTCTGGAGGACATTTTGTGAGCTTTTGCGAAGTAAGCAGGAGCTTGTATACTGGAATTATACATGCAGATGACGGTATTGTATCATTCGAAGTACCTGAAAACACAACAGAAGATGTTGCAGGAAATAAAAACCTTGCTTCAAACAGGCTGCAAGTGAGACACTATTCTGTACCTTTGATATCTGCACTGATTTCTACTGTAGCAACAACTACATTCGCTGCCACAACCATGGCAGCAGCATTCCTCACAGTTACTTCTGCAAGCCTTCTTTCCTCTGGAGTATTTTCAAGACCATCAACTCATTTGACATTAGAGCCAGCAAAAAACCTCATGAAAATTGCATGCCACATCCAAATTTTTGCACTATCAAAGTGGTTAACAGCTATATTGCCTATTGAATATTATGAATTTGCAAGAAGCATGGAGTGGAGTATCCCATATATTAATCTTCCTTGGGAAAATGAGGGCATGGATTCATTCTTGAAAGATTCAAGTCTTCCAGTCGTGACATACAGTAAGCTATTTGAAGGGAAGATGCTGAAGTATTTGGCACCTAATATTATAACAAATGAGGAATCTGGGAGGGCGCTATATGGAAAACCACTTACTCCAATAGAATATCGAGCATTTTTTGAGAATCAAAATATGAAGCCTGAAGCAGAAATTATAAGAACCTCGCAAAGCCTAGACACGTGGAAATATTTTGGCAGAAACATGTTTTGGTTGGCACTGATCTGTGGTGGCCTGCTAGCCCTTCATGCAATACTACTGCTCATTCTTAGATCAAGGAGGAGAAAAGTTGAAGAACAGAAGGAATTTGGAGCTCTGGTGTTCCCAAGAATTGAAGTATTCTTATTAATCCTTGCACTGCCATCAATATGCCAGGCATCATCAACTTTGATCAGAGGTCGAACCGCAACCGGAGTTTCAGTCGGAATCGTACTTCTAAGCATAGAAGCATTCCTTCTCATATCACTGCTTGTGTTCCTATCCGTTGGAATCGCCCTCGGCAAGCTCCTCCGGTACAAAGAAGTTCATAAGGAATGCCAGAAGCTCAATTGGCACAATGAGCTTTCTAGTGTTTCGCTCGGCCCTGTCAAACAAGGCTATTGGAGTTGGACGGACCCGCCAAGTTCGTTGAACCTTTTGCGGTTCGGACCGCTCTTCGAGGACCTTCGATTCGTCTCAGAGGACGAAAGCGATGATAATGCCGCGACTCCCGTCTCCTTCTTCTTCCATAAACTTCTTGGCATCCTCAGGATCTACTACACCTTCATTGATTCAGCGAAGCGCGCTTCGTTCGGCATCATCGCCGGAGCCTGCTTCAGCCAAAATTCATCGAAACCCCCTATTTTGATAGTCCTCTCAATCACCTCGTTCCAGCTTTTCTCCGTTGTGGTGAGTAAACCATTCATCAAACGGACGGTGCAATTAGTTGAGACCGTCGCGGTCTTGAGTGAAGTCGGAGTGCTCTGCTCGTGCCTCGCCTTGCTTGAGGATGATTTGTCCGATGCCGGACAGAGGAGGATCGGCTTCTTGATGCTTGCTTTGTTCGCTTTCAGCTTTTCCGCGCAGATGATGAATGAATGGTATGCATTGTACAAGCAAACGGTTGAGATTAGTTCTGGCAGGAACTCATTCTGCCAGGGATTGAAGGTTGCATTTGCCGGGATTCTCCTGCTTGTGCTTCCATCGAGCTTGACGAAGGAATGGAGGGAGGAATTCTGCTCCAGGGAGAGGCCGTGGCTGAGGCAGCTGAGGCAATTGGCCAAGGCTAGCTTTAATATGGAAGAGACTGGAGCTGTGGCCGATCATCCTTCGAGCAGCCAAAATCCCGCGGAGGCGAAGGCGGACTTGAAGGCTGAGCCCAAGGAACTGTATAAAGATCTTGAGGCGATTTTTTCGTCAAATTGAAGAAGATGATAGAGAGCTTTTTTGAGTGCACGTTTTTTTTTTTTTTTTTT

Network for GWHGAAEX014176

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX014176
MGFRSRGQWLPLLLLIRLFTIVAASEALAGSQFSLRFAKTPQPFSPFDSAAFEFQILDLISGLLCRDCAVSCKLDSHSFADCNSRQVTYSSLNDGGHLFEACFSRFHELRCYSYNWTIDTIPPTAYVSVRTPFTNGSDVPVHIVFSEPCNGGGGFRCSPDHCSLLVYGAGNVLSDSLKVIQPGLEFSVNVSISVGIQYGRLVLVMDKNFCTDAAGNRFTRTLNSSFLLHFDRRPVFMNIRTRISEKLLKLDGNMRRVKATNNQRDLIIYLHFSEPVLNSSAQVLNALHASSVVLAPVNGSTLGNRRLRYKITGVSSTNVVTINCALNSILSRQGTPVSVSDPFTFLYDVQRPTVRLSTIADLRTRERNIPVFIKFVKPVFEFNSSSVLVSGGHFVSFCEVSRSLYTGIIHADDGIVSFEVPENTTEDVAGNKNLASNRLQVRHYSVPLISALISTVATTTFAATTMAAAFLTVTSASLLSSGVFSRPSTHLTLEPAKNLMKIACHIQIFALSKWLTAILPIEYYEFARSMEWSIPYINLPWENEGMDSFLKDSSLPVVTYSKLFEGKMLKYLAPNIITNEESGRALYGKPLTPIEYRAFFENQNMKPEAEIIRTSQSLDTWKYFGRNMFWLALICGGLLALHAILLLILRSRRRKVEEQKEFGALVFPRIEVFLLILALPSICQASSTLIRGRTATGVSVGIVLLSIEAFLLISLLVFLSVGIALGKLLRYKEVHKECQKLNWHNELSSVSLGPVKQGYWSWTDPPSSLNLLRFGPLFEDLRFVSEDESDDNAATPVSFFFHKLLGILRIYYTFIDSAKRASFGIIAGACFSQNSSKPPILIVLSITSFQLFSVVVSKPFIKRTVQLVETVAVLSEVGVLCSCLALLEDDLSDAGQRRIGFLMLALFAFSFSAQMMNEWYALYKQTVEISSGRNSFCQGLKVAFAGILLLVLPSSLTKEWREEFCSRERPWLRQLRQLAKASFNMEETGAVADHPSSSQNPAEAKADLKAEPKELYKDLEAIFSSN

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.390
SRP064423	SRR2545915	Juvenile tuber	2.920
SRP108465	SRR5643513	five period of Gastrodia elata	3.530
	SRR5643514	five period of Gastrodia elata	5.040
	SRR5643515	five period of Gastrodia elata	3.570
	SRR5643524	five period of Gastrodia elata	4.350
	SRR5643525	five period of Gastrodia elata	1.870
	SRR5643528	five period of Gastrodia elata	1.450
	SRR5643658	five period of Gastrodia elata	1.340
	SRR5643659	five period of Gastrodia elata	2.080
	SRR5643660	five period of Gastrodia elata	1.530
	SRR5643661	five period of Gastrodia elata	1.790
	SRR5643662	five period of Gastrodia elata	1.920
	SRR5643663	five period of Gastrodia elata	2.110
	SRR5643664	five period of Gastrodia elata	1.960
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.020
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.590
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.630
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.460
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.270
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.870
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.240
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.320
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.150
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.590
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	4.020
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	4.020
SRP279888	Gastro	Gastrodia elata tuber	1.35
	Juven	Juvenile tuber	1.30
	Mother_Gastro	Mother tuber of Gastrodia elata	1.43
	Mother_Juven	Mother tuber of Juvenile	1.46