Detail information of GWHGAAEX014197/evm.TU.scaffold_57.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21542.00E-08Predicted nucleolar protein involved in ribosome biogenesis
nrgi|672180199|ref|XP_008810283.1|1.50E-11PREDICTED: uncharacterized protein LOC103721744 [Phoenix dactylifera]
trEMBLtr|K7LDH6|K7LDH6_SOYBN6.00E-13Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G22854.1}
TAIRAT2G172502.00E-08CCAAT-binding factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005540854774085983+
Transcript Sequence

Network for GWHGAAEX014197

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata2.710
SRR5643514five period of Gastrodia elata5.420
SRR5643515five period of Gastrodia elata10.520
SRR5643524five period of Gastrodia elata8.180
SRR5643525five period of Gastrodia elata20.780
SRR5643528five period of Gastrodia elata17.320
SRR5643658five period of Gastrodia elata14.210
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.220
SRR5643661five period of Gastrodia elata0.220
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.330
SRR6049655Rhizomagastrodiae_C368-T10_good_17.330
SRR6049656Rhizomagastrodiae_C368-T07_good_11.290
SRR6049657Rhizomagastrodiae_C368-T07_good_11.350
SRR6049658Rhizomagastrodiae_C368-T04_good_13.810
SRR6049659Rhizomagastrodiae_C368-T04_good_13.640
SRR6049660Rhizomagastrodiae_C368-T01_good_13.790
SRR6049661Rhizomagastrodiae_C368-T04_good_11.550
SRR6049662Rhizomagastrodiae_C368-T01_good_18.750
SRR6049663Rhizomagastrodiae_C368-T01_good_18.020
SRR6049664Rhizomagastrodiae_C368-T10_good_17.370
SRR6049665Rhizomagastrodiae_C368-T10_good_17.370
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.46
Mother_GastroMother tuber of Gastrodia elata 27.57
Mother_JuvenMother tuber of Juvenile 17.91